Evidence map›Paper›PMID 30234459›Full record

ArticleZebrafish2018

Zebrabase: An Intuitive Tracking Solution for Aquatic Model Organisms.

Jana Oltova, Jindrich Jindrich, Ctibor Skuta, Ondrej Svoboda, Olga Machonova, Petr Bartunek

Abstract read
In one paragraph

Article in Zebrafish, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jana Oltova1 Department of Cell Differentiation, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .
Jindrich Jindrich2 CZ-OPENSCREEN, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .
Ctibor Skuta2 CZ-OPENSCREEN, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .
Ondrej Svoboda1 Department of Cell Differentiation, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .
Olga Machonova1 Department of Cell Differentiation, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .
Petr Bartunek1 Department of Cell Differentiation, Institute of Molecular Genetics AS CR v.v.i. , Prague, Czech Republic .

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small fish species, such as zebrafish and medaka, are increasingly gaining popularity in basic research and disease modeling as a useful alternative to rodent model organisms. However, the tracking options for fish within a facility are rather limited. In this study, we present an aquatic species tracking database, Zebrabase, developed in our zebrafish research and breeding facility that represents a practical and scalable solution and an intuitive platform for scientists, fish managers, and caretakers, in both small and large facilities. Zebrabase is a scalable, cross-platform fish tracking database developed especially for fish research facilities. Nevertheless, this platform can be easily adapted for a wide variety of aquatic model organisms housed in tanks. It provides sophisticated tracking, reporting, and management functions that help keep animal-related records well organized, including a QR code functionality for tank labeling. The implementation of various user roles ensures a functional hierarchy and customized access to specific functions and data. In addition, Zebrabase makes it easy to personalize rooms and racks, and its advanced statistics and reporting options make it an excellent tool for creating periodic reports of animal usage and productivity. Communication between the facility and the researchers can be streamlined by the database functions. Finally, Zebrabase also features an interactive breeding history and a smart interface with advanced visualizations and intuitive color coding that accelerate the processes.

Indexed as

Animals, LaboratorySoftwareZebrafishAnimal HusbandryAnimalsAquacultureDatabases, FactualElectronic Data ProcessingEnvironmental MonitoringDjangofacility databasehusbandryPythontrackingzebrafish

Identifiers

PMID30234459
PMCPMC6277078

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.