Evidence map›Paper›PMID 30233511›Full record

ArticleFrontiers in microbiology2018

Assessment of Bacterial Communities Associated With the Skin of Costa Rican Amphibians at La Selva Biological Station.

Juan G Abarca, Gabriel Vargas, Ibrahim Zuniga, Steven M Whitfield, Douglas C Woodhams, Jacob Kerby, Valerie J McKenzie, Catalina Murillo-Cruz, Adrián A Pinto-Tomás

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Skin microbiota during metamorphosis ofFrontiers in microbiology · 2024
    Article
  6. Article
  7. Article
  8. Interspecific and intraspecific Taylor's laws for frog skin microbes.Computational and structural biotechnology journal · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Juan G AbarcaCentro de Investigación en Estructuras Microscópicas, Universidad de Costa Rica, San Pedro, Costa Rica.
Gabriel VargasDepartment of the Geophysical Sciences, University of Chicago, Chicago, IL, United States.
Ibrahim ZunigaDepartamento de Bioquímica, Escuela de Medicina, Universidad de Costa Rica, San Pedro, Costa Rica.
Steven M WhitfieldDepartment of Conservation and Research, Zoo Miami, Miami, FL, United States.
Douglas C WoodhamsDepartment of Biology, University of Massachusetts, Boston, MA, United States.
Jacob KerbyDepartment of Biology, University of South Dakota, Vermillion, SD, United States.
Valerie J McKenzieDepartment of Ecology and Evolutionary Biology, University of Colorado, Boulder, Boulder, CO, United States.
Catalina Murillo-CruzCentro de Investigación en Estructuras Microscópicas, Universidad de Costa Rica, San Pedro, Costa Rica.
Adrián A Pinto-TomásCentro de Investigación en Estructuras Microscópicas, Universidad de Costa Rica, San Pedro, Costa Rica.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amphibian skin is a suitable environment for rich communities of microorganisms, both beneficial and detrimental to the host. The amphibian cutaneous microbiota has been hypothesized to play an important role as symbionts, protecting their hosts against disease. Costa Rica has one of the most diverse assemblages of amphibians in the world and we know very little about the microbiota of these tropical animals. For comparison with other studies, we explore the diversity of the skin bacterial communities employing16S rRNA amplicon sequencing of swab samples from twelve species of frogs at La Selva Biological Station in Sarapiquí, Heredia province. The predominant phylum detected in our studies was Proteobacteria, followed by Bacteroidetes and Actinobacteria, with these three phyla representing 89.9% of the total bacterial taxa. At the family level, Sphingobacteriaceae and Comamonadaceae were highly represented among samples. Our results suggest that host species and host family are significant predictors of the variation in microbiota composition. This study helps set the foundation for future research about microbiota composition and resilience to unfavorable conditions, leading to improvement in managing strategies for endangered amphibian species.

Indexed as

amphibianbacterial communitiesBatrachochytrium dendrobatidisLa Selva Biological Stationmicrobiota

Identifiers

PMID30233511
PMCPMC6129598

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.