Evidence map›Paper›PMID 30232404›Full record

ArticleScientific reports2018

TGF-β1 promotes expression of fibrosis-related genes through the induction of histone variant H3.3 and histone chaperone HIRA.

Toshihiro Shindo, Shigehiro Doi, Ayumu Nakashima, Kensuke Sasaki, Koji Arihiro, Takao Masaki

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Toshihiro ShindoDepartment of Nephrology, Hiroshima University Hospital, Hiroshima, Japan.
Shigehiro DoiDepartment of Nephrology, Hiroshima University Hospital, Hiroshima, Japan. sdoi@hiroshima-u.ac.jp.
Ayumu NakashimaDepartment of Nephrology, Hiroshima University Hospital, Hiroshima, Japan.ORCID 0000-0002-7838-1494
Kensuke SasakiDepartment of Nephrology, Hiroshima University Hospital, Hiroshima, Japan.
Koji ArihiroDepartment of Pathology, Hiroshima University Hospital, Hiroshima, Japan.
Takao MasakiDepartment of Nephrology, Hiroshima University Hospital, Hiroshima, Japan. masakit@hiroshima-u.ac.jp.
Hiroshima University Hospital · JP

Funding

Japan Society for the Promotion of Science (JSPS) 16K19489
6 · The paper itself

Abstract

Renal fibrosis is a histological manifestation that occurs in almost every type of chronic kidney disease. Histone variant H3.3 and its chaperone, histone cell cycle regulation defective homolog A (HIRA), serve as epigenetic marks that regulate transcriptional activity. In this study, we assessed the roles of histone H3.3 and HIRA in unilateral ureteral-obstruction (UUO) mice. In UUO mice, the levels of histone H3.3 and HIRA were significantly upregulated in the kidneys. These upregulated levels were decreased by a TGF-β1 neutralizing antibody. TGF-β1 induced histone H3.3 and HIRA expression in vitro via a Smad3-dependent pathway in normal rat kidney (NRK)-52E cells. Additionally, knockdown of HIRA expression decreased histone H3.3 expression and fibrogenesis in NRK-52E cells after TGF-β1 stimulation. Chromatin immunoprecipitation analysis revealed that promoters of fibrosis-related genes were immunoprecipitated with both histone H3.3 and HIRA in NRK-52E cells. Lastly, in human kidney biopsies from patients diagnosed with IgA nephropathy, histone H3.3 and HIRA immunostaining correlated positively with areas of fibrosis and estimated glomerular filtration rate. In conclusion, TGF-β1 induces expression of histone H3.3 and HIRA, which regulates expression of fibrosis-related genes.

Indexed as

Promoter Regions, GeneticAdultAnimalsAntibodies, NeutralizingCell LineChromatin ImmunoprecipitationDisease Models, AnimalFemaleFibrosisGene Expression RegulationGlomerulonephritis, IGAHistone ChaperonesHistonesHumansMaleMiceAntibodies, NeutralizingHistone ChaperonesHistonesSmad3 ProteinTransforming Growth Factor beta1

Identifiers

PMID30232404
PMCPMC6145928
OpenAlexW2891957689

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.