Evidence map›Paper›PMID 30232363›Full record

ArticleHeredity2018

Long-term evolution on complex fitness landscapes when mutation is weak.

David M McCandlish

Abstract read
In one paragraph

Article in Heredity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Inference and visualization of complex genotype-phenotype maps withbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Master regulators of biological systems in higher dimensions.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Impact of population size on early adaptation in rugged fitness landscapes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  6. Higher-order epistasis and phenotypic prediction.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. The evolutionary scaling of cellular traits imposed by the drift barrier.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

David M McCandlishSimons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA. mccandlish@cshl.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding evolution on complex fitness landscapes is difficult both because of the large dimensionality of sequence space and the stochasticity inherent to population-genetic processes. Here, I present an integrated suite of mathematical tools for understanding evolution on time-invariant fitness landscapes when mutations occur sufficiently rarely that the population is typically monomorphic and evolution can be modeled as a sequence of well-separated fixation events. The basic intuition behind this suite of tools is that surrounding any particular genotype lies a region of the fitness landscape that is easy to evolve to, while other pieces of the fitness landscape are difficult to evolve to (due to distance, being across a fitness valley, etc.). I propose a rigorous definition for this "dynamical neighborhood" of a genotype which captures several aspects of the distribution of waiting times to evolve from one genotype to another. The neighborhood structure of the landscape as a whole can be summarized as a matrix, and I show how this matrix can be used to approximate the expected waiting time for certain evolutionary events to occur and to provide an intuitive interpretation to existing formal results on the index of dispersion of the molecular clock.

Indexed as

Genetic FitnessMutationAdaptation, PhysiologicalGenotype

Identifiers

PMID30232363
PMCPMC6180110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.