Evidence map›Paper›PMID 30231186›Full record

ArticleAngewandte Chemie (International ed. in English)2018

Chemoproteomic Profiling of Phosphoaspartate Modifications in Prokaryotes.

Jae Won Chang, Jeffrey E Montgomery, Gihoon Lee, Raymond E Moellering

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Direct energy consumption by inhibitory GABAFrontiers in neuroscience · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Ultrasensitive, multiplexed chemoproteomic profiling with soluble activity-dependent proximity ligation.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jae Won ChangDepartment of Chemistry, Institute for Genomics and Systems Biology, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.
Jeffrey E MontgomeryDepartment of Chemistry, Institute for Genomics and Systems Biology, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.
Gihoon LeeDepartment of Chemistry, Institute for Genomics and Systems Biology, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.
Raymond E MoelleringDepartment of Chemistry, Institute for Genomics and Systems Biology, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.ORCID 0000-0002-2043-7838
University of Chicago · US

Funding

Conformational Flexibility in Activation of Src-KinaseR01CA093577 · NCI · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI BENOIT ROUX · 2002 to 2026
$5.6M
Predoctoral Training Program in Chemistry & BiologyT32GM008720 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY · 1999 to 2020
$4.7M
Targeting Transcription with Synthetic BiologicsDP2GM128199 · NIGMS · UNIVERSITY OF CHICAGO · PI MOELLERING, RAYMOND E · 2017 to 2017
$2.3M
Mapping Protein Social Network Dynamics with Photoproximity Profiling PlatformsR01GM145852 · NIGMS · UNIVERSITY OF CHICAGO · PI MOELLERING, RAYMOND E · 2022 to 2025
$1.5M
Distribution, regulation and function of a novel lysine PTM in metabolic diseaseR00CA175399 · NCI · UNIVERSITY OF CHICAGO · PI MOELLERING, RAYMOND E · 2015 to 2017
$712k
Damon Runyon Cancer Research Foundation DFS08-14NCI NIH HHS 2R01CA093577-11NCI NIH HHS R00 CA175399NCI NIH HHS R00CA175399NCI NIH HHS R01 CA093577NIGMS NIH HHS 2T32GM008720-16NIGMS NIH HHS DP2 GM128199NIGMS NIH HHS DP2GM128199-01NIGMS NIH HHS R01 GM145852NIGMS NIH HHS T32 GM008720
6 · The paper itself

Abstract

Phosphorylation at aspartic acid residues represents an abundant and critical post-translational modification (PTM) in prokaryotes. In contrast to most characterized PTMs, such as phosphorylation at serine or threonine, the phosphoaspartate moiety is intrinsically labile, and therefore incompatible with common proteomic profiling methods. Herein, we report a nucleophilic, desthiobiotin-containing hydroxylamine (DBHA) chemical probe that covalently labels modified aspartic acid residues in native proteomes. DBHA treatment coupled with LC-MS/MS analysis enabled detection of known phosphoaspartate modifications, as well as novel aspartic acid sites in the E. coli proteome. Coupled with isotopic labelling, DBHA-dependent proteomic profiling also permitted global quantification of changes in endogenous protein modification status, as demonstrated with the detection of increased E. coli OmpR phosphorylation, but not abundance, in response to changes in osmolarity.

Indexed as

Aspartic AcidBacterial ProteinsEscherichia coliHydroxylaminePhosphorylationProkaryotic CellsTrans-ActivatorsAspartic AcidBacterial ProteinsHydroxylamineosmolarity response regulator proteinsTrans-Activatorschemoproteomicsphosphoaspartate modificationresponse regulatortwo-component signalling

Identifiers

PMID30231186
PMCPMC6760989
OpenAlexW2891784362

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.