Evidence map›Paper›PMID 30231073›Full record

ArticlePloS one2018

Shifts in ovine cardiopulmonary microRNA expression in late gestation and the perinatal period.

Ramona H Krauss, Belinda Phipson, Alicia Oshlack, Nikita Prasad-Gupta, Michael M Cheung, Joseph J Smolich, Salvatore Pepe

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Potential Novel Biomarkers for Mastitis Diagnosis in Sheep.Animals : an open access journal from MDPI · 2021
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ramona H KraussHeart Research, Murdoch Children's Research Institute, Melbourne, Australia.
Belinda PhipsonBioinformatics, Murdoch Children's Research Institute, Melbourne, Australia.
Alicia OshlackDepartment of Paediatrics, University of Melbourne, Melbourne, Australia.
Nikita Prasad-GuptaHeart Research, Murdoch Children's Research Institute, Melbourne, Australia.
Michael M CheungHeart Research, Murdoch Children's Research Institute, Melbourne, Australia.
Joseph J SmolichHeart Research, Murdoch Children's Research Institute, Melbourne, Australia.
Salvatore PepeHeart Research, Murdoch Children's Research Institute, Melbourne, Australia.ORCID 0000-0002-5547-0232
The University of Melbourne · AURoyal Children's Hospital · AUMurdoch Children's Research Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMicroRNAs (miRNAs) have been identified as important contributors to the regulation of early fetal cardiopulmonary development. However, miRNA expression profiles during late gestation and the early neonatal period are not fully elaborated in large mammals such as sheep (ovis aries). The aim of this study was to sequence miRNA from cardiopulmonary tissues in late gestation and neonate sheep to identify changes in miRNA expression.

methodsIllumina HiSeq next-generation deep sequencing (NGS) was performed on ovine tissues from the left (LV) and right ventricles (RV), lungs and pulmonary artery (PA) of preterm fetuses (128 days), near-term fetuses (140 days) (term = 148 days) and neonatal lambs (5 days). NGS reads were mapped to the sheep genome (OviAri) and published miRNA sequences.

resultsOf 1345 cardiopulmonary miRNAs that were sequenced, relatively few major shifts in miRNA expression were detected with increased age from near term to neonates, and were confirmed by quantitative real-time PCR: bta-miR-146a (lung), bta-miR-22-3p (lung, LV), hsa-miR-335* (lung, PA), and miR-210 (lung, PA, LV).

conclusionsSequencing of miRNA led to identification of four predominant miRNA in ovine cardiopulmonary tissues which alter expression during late gestation and the early neonatal period, concurrent with important functional changes in heart and lungs.

Indexed as

AnimalsAnimals, NewbornBase SequenceFemaleFetal DevelopmentFetal HeartGene Expression Regulation, DevelopmentalGestational AgeHeartHigh-Throughput Nucleotide SequencingLungMicroRNAsMyocardiumPregnancyReal-Time Polymerase Chain ReactionSequence Analysis, RNAMicroRNAs

Identifiers

PMID30231073
PMCPMC6145571
OpenAlexW2891455144

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.