Evidence map›Paper›PMID 30230473›Full record

ArticleeLife2018

Condensin controls cellular RNA levels through the accurate segregation of chromosomes instead of directly regulating transcription.

Clémence Hocquet, Xavier Robellet, Laurent Modolo, Xi-Ming Sun, Claire Burny, Sara Cuylen-Haering, Esther Toselli, Sandra Clauder-Münster, Lars Steinmetz, Christian H Haering and 2 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

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  13. International journal of molecular sciences · 2020
    Article
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  16. Article
  17. Article
  18. Review
  19. Condensin action and compaction.Current genetics · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Clémence Hocquet *CNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.
Xavier Robellet *CNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.
Laurent ModoloCNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.
Xi-Ming SunMRC London Institute of Medical Sciences, London, United Kingdom.
Claire BurnyCNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.
Sara Cuylen-HaeringCell Biology and Biophysics Unit, Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-1193-4648
Esther ToselliCNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.
Sandra Clauder-MünsterGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Lars SteinmetzGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Christian H HaeringCell Biology and Biophysics Unit, Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-8301-1722
Samuel MargueratMRC London Institute of Medical Sciences, London, United Kingdom.
Pascal BernardCNRS Laboratory of Biology and Modelling of the Cell, Lyon, France.ORCID http://orcid.org/0000-0003-2732-9685
Université Claude Bernard Lyon 1 · FREuropean Molecular Biology Laboratory · DEEuropean Molecular Biology Laboratory · DEMRC London Institute of Medical Sciences · GB

Funding

Agence Nationale de la Recherche ANR-15-CE12-0002-01Fondation ARC pour la Recherche sur le Cancer PJA 20151203343Fondation pour la Recherche Médicale FDT20170437039Medical Research Council MC_UP_1102/8
6 · The paper itself

Abstract

Condensins are genome organisers that shape chromosomes and promote their accurate transmission. Several studies have also implicated condensins in gene expression, although any mechanisms have remained enigmatic. Here, we report on the role of condensin in gene expression in fission and budding yeasts. In contrast to previous studies, we provide compelling evidence that condensin plays no direct role in the maintenance of the transcriptome, neither during interphase nor during mitosis. We further show that the changes in gene expression in post-mitotic fission yeast cells that result from condensin inactivation are largely a consequence of chromosome missegregation during anaphase, which notably depletes the RNA-exosome from daughter cells. Crucially, preventing karyotype abnormalities in daughter cells restores a normal transcriptome despite condensin inactivation. Thus, chromosome instability, rather than a direct role of condensin in the transcription process, changes gene expression. This knowledge challenges the concept of gene regulation by canonical condensin complexes.

Indexed as

Gene Expression Regulation, FungalAdenosine TriphosphatasesChromosome SegregationDNA-Binding ProteinsG2 PhaseGene Expression ProfilingGenomic InstabilityGreen Fluorescent ProteinsMicroscopy, ConfocalMultiprotein ComplexesMutationRNA, FungalSchizosaccharomycesS PhaseAdenosine Triphosphatasescondensin complexesDNA-Binding ProteinsGreen Fluorescent ProteinsMultiprotein ComplexesRNA, Fungalchromosomescondensingene expressionRNA-exosomeS. cerevisiaeSMCsS. pombe

Identifiers

PMID30230473
PMCPMC6173581
OpenAlexW2951914404

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.