Evidence map›Paper›PMID 30229513›Full record

ArticleProbiotics and antimicrobial proteins2019

Genome Sequencing and Analysis of Bacillus pumilus ICVB403 Isolated from Acartia tonsa Copepod Eggs Revealed Surfactin and Bacteriocin Production: Insights on Anti-Staphylococcus Activity.

Mahammed Zidour, Yanath Belguesmia, Benoit Cudennec, Thierry Grard, Christophe Flahaut, Sami Souissi, Djamel Drider

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In one paragraph

Article in Probiotics and antimicrobial proteins, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. AntimicrobialAntibiotics (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Mahammed ZidourUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France.
Yanath BelguesmiaUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France. Yanath.Belguesmia@polytech-lille.fr.
Benoit CudennecUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France.
Thierry GrardUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France.
Christophe FlahautUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France.
Sami SouissiUniversité de Lille, CNRS, Université du Littoral Côte d'Opale, Laboratoire d'Océanologie et de Géosciences, UMR 8187 LOG, Wimereux, France.
Djamel DriderUniversité de Lille, INRA, ISA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, Lille, France. Djamel.Drider@univ-lille.fr.
École Polytechnique · FRInstitut Charles Viollette · FRCentre National de la Recherche Scientifique · FRUniversité du littoral côte d'opale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we show that Bacillus pumilus ICVB403 recently isolated from copepod eggs is able to produce, after 48-72 h of growth in Landy medium, extracellular inhibitory compounds, which are active against Staphylococcus aureus ATCC 25923, methicillin-resistant S. aureus (MRSA) ATCC 43300, MRSA-S1, Staphylococcus epidermidis 11EMB, Staphylococcus warneri 27EMB, and Staphylococcus hominis 13EMB. Moreover, these extracellular inhibitory compound(s) were able to potentiate erythromycin against the aforementioned staphylococci. The minimum inhibitory concentration (MIC) of erythromycin was reduced from 32 μg/mL to 8 μg/mL for MRSA ATCC 43300 and MRSA SA-1 strains, and from 32-64 μg/mL to 4 μg/mL for S. epidermidis 11EMB and S. hominis 13EMB strains.The genome sequencing and analysis of B. pumilus ICVB403 unveiled 3.666.195 nucleotides contained in 22 contigs with a G + C ratio of 42.0%, 3.826 coding sequences, and 73 RNAs. In silico analysis guided identification of two putative genes coding for synthesis of surfactin A, a lipopeptide with 7 amino acids, and for a circular bacteriocin belonging to the circularin A/uberolysin family, respectively.

Indexed as

AnimalsAnti-Bacterial AgentsBacillus pumilusBacteriocinsCopepodaEggsGenome, BacterialLipopeptidesMicrobial Sensitivity TestsSequence Analysis, DNAStaphylococcus aureusAnti-Bacterial AgentsBacteriocinsLipopeptidessurfactin AAntagonismBacillus pumilusBacteriocinCopepodsMethicillin-resistant Staphylococcus aureusSurfactin

Identifiers

PMID30229513
OpenAlexW2891347140

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.