Evidence map›Paper›PMID 30228379›Full record

ArticleThe ISME journal2019

Bacterial community structure in a sympagic habitat expanding with global warming: brackish ice brine at 85-90 °N.

Beatriz Fernández-Gómez, Beatriz Díez, Martin F Polz, José Ignacio Arroyo, Fernando D Alfaro, Germán Marchandon, Cynthia Sanhueza, Laura Farías, Nicole Trefault, Pablo A Marquet and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Beatriz Fernández-GómezDepartment of Molecular Genetics and Microbiology, Pontifical University Catholic of Chile, Santiago, Chile.
Beatriz DíezDepartment of Molecular Genetics and Microbiology, Pontifical University Catholic of Chile, Santiago, Chile. bdiez@bio.puc.cl.
Martin F PolzDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, USA.
José Ignacio ArroyoDepartment of Ecology, Pontifical University Catholic of Chile, Santiago, Chile.
Fernando D AlfaroGEMA Center for Genomics, Ecology & Environment, Universidad Mayor, Santiago, Chile.ORCID http://orcid.org/0000-0003-2922-1838
Germán MarchandonDepartment of Molecular Genetics and Microbiology, Pontifical University Catholic of Chile, Santiago, Chile.
Cynthia SanhuezaDepartment of Molecular Genetics and Microbiology, Pontifical University Catholic of Chile, Santiago, Chile.
Laura FaríasCenter for Climate and Resilience Research, Concepción, Chile.
Nicole TrefaultGEMA Center for Genomics, Ecology & Environment, Universidad Mayor, Santiago, Chile.
Pablo A MarquetDepartment of Ecology, Pontifical University Catholic of Chile, Santiago, Chile.ORCID http://orcid.org/0000-0001-6369-9339
Marco A Molina-MontenegroInstituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile.
Peter SylvanderDepartment of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden.
Pauline Snoeijs-LeijonmalmDepartment of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-4544-2668
Pontificia Universidad Católica de Chile · CLStockholm University · SEUniversidad Mayor · CLMassachusetts Institute of Technology · USUniversity of Concepción · CLUniversity of Talca · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Larger volumes of sea ice have been thawing in the Central Arctic Ocean (CAO) during the last decades than during the past 800,000 years. Brackish brine (fed by meltwater inside the ice) is an expanding sympagic habitat in summer all over the CAO. We report for the first time the structure of bacterial communities in this brine. They are composed of psychrophilic extremophiles, many of them related to phylotypes known from Arctic and Antarctic regions. Community structure displayed strong habitat segregation between brackish ice brine (IB; salinity 2.4-9.6) and immediate sub-ice seawater (SW; salinity 33.3-34.9), expressed at all taxonomic levels (class to genus), by dominant phylotypes as well as by the rare biosphere, and with specialists dominating IB and generalists SW. The dominant phylotypes in IB were related to Candidatus Aquiluna and Flavobacterium, those in SW to Balneatrix and ZD0405, and those shared between the habitats to Halomonas, Polaribacter and Shewanella. A meta-analysis for the oligotrophic CAO showed a pattern with Flavobacteriia dominating in melt ponds, Flavobacteriia and Gammaproteobacteria in solid ice cores, Flavobacteriia, Gamma- and Betaproteobacteria, and Actinobacteria in brine, and Alphaproteobacteria in SW. Based on our results, we expect that the roles of Actinobacteria and Betaproteobacteria in the CAO will increase with global warming owing to the increased production of meltwater in summer. IB contained three times more phylotypes than SW and may act as an insurance reservoir for bacterial diversity that can act as a recruitment base when environmental conditions change.

Indexed as

Global WarmingActinobacteriaAlphaproteobacteriaAntarctic RegionsArctic RegionsBacteriaEcosystemFlavobacteriaceaeGammaproteobacteriaIce CoverSalinitySeasonsSeawater

Identifiers

PMID30228379
PMCPMC6331608
OpenAlexW2891677586

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.