Evidence map›Paper›PMID 30226859›Full record

ArticlePloS one2018

ATRX loss induces multiple hallmarks of the alternative lengthening of telomeres (ALT) phenotype in human glioma cell lines in a cell line-specific manner.

Jacqueline A Brosnan-Cashman, Ming Yuan, Mindy K Graham, Anthony J Rizzo, Kaylar M Myers, Christine Davis, Rebecca Zhang, David M Esopi, Eric H Raabe, Charles G Eberhart and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
  2. Article
  3. Alternative Lengthening of Telomeres: The Need forInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Article
  6. Loss of function ofiScience · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Targeting ATR in patients with cancer.Nature reviews. Clinical oncology · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Jacqueline A Brosnan-CashmanDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.ORCID 0000-0001-9579-2853
Ming YuanDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Mindy K GrahamDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.ORCID 0000-0003-2521-0373
Anthony J RizzoDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.ORCID 0000-0003-2170-6988
Kaylar M MyersDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Christine DavisDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Rebecca ZhangDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
David M EsopiDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Eric H RaabeDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Charles G EberhartDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Christopher M HeaphyDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Alan K MeekerDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America.
Johns Hopkins University · US

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI Rosalie Wollett · 1985 to 2026
$208.6M
TRAINING IN AREAS FUNDAMENTAL TO CANCER RESEARCHT32CA009110 · NCI · JOHNS HOPKINS UNIVERSITY · PI MATUNIS, MICHAEL J., WEERARATNA, ASHANI T · 1985 to 2025
$13.1M
Determining the Roles of ATRX and DAXX Abnormalities in Cancer Telomere BiologyR01CA172380 · NCI · JOHNS HOPKINS UNIVERSITY · PI MEEKER, ALAN KEITH · 2013 to 2017
$1.7M
Establishing in vitro carcinoma models of the Alternative Lengthening of Telomeres pathway to elucidate molecular mechanisms and identify therapeutic vulnerabilitiesF32CA213742 · NCI · JOHNS HOPKINS UNIVERSITY · PI GRAHAM, MINDY KIM · 2017 to 2018
$118k
NCI NIH HHS F32 CA213742NCI NIH HHS P30 CA006973NCI NIH HHS R01 CA172380NCI NIH HHS T32 CA009110
6 · The paper itself

Abstract

Cancers must maintain their telomeres at lengths sufficient for cell survival. In several cancer subtypes, a recombination-like mechanism termed alternative lengthening of telomeres (ALT), is frequently used for telomere length maintenance. Cancers utilizing ALT often have lost functional ATRX, a chromatin remodeling protein, through mutation or deletion, thereby strongly implicating ATRX as an ALT suppressor. Herein, we have generated functional ATRX knockouts in four telomerase-positive, ALT-negative human glioma cell lines: MOG-G-UVW, SF188, U-251 and UW479. After loss of ATRX, two of the four cell lines (U-251 and UW479) show multiple characteristics of ALT-positive cells, including ultrabright telomeric DNA foci, ALT-associated PML bodies, and c-circles. However, telomerase activity and overall telomere length heterogeneity are unaffected after ATRX loss, regardless of cellular context. The two cell lines that showed ALT hallmarks after complete ATRX loss also did so upon ATRX depletion via shRNA-mediated knockdown. These results suggest that other genomic or epigenetic events, in addition to ATRX loss, are necessary for the induction of ALT in human cancer.

Indexed as

Cell Line, TumorChromatinDNA HelicasesGliomaHumansPhenotypeTelomeraseTelomereTelomere HomeostasisX-linked Nuclear ProteinATRX protein, humanChromatinDNA HelicasesTelomeraseX-linked Nuclear Protein

Identifiers

PMID30226859
PMCPMC6143253
OpenAlexW2891577081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.