Evidence map›Paper›PMID 30225736›Full record

ArticleJournal of fluorescence2018

Wavelength-Selective Fluorescence of a Model Transmembrane Peptide: Constrained Dynamics of Interfacial Tryptophan Anchors.

Sreetama Pal, Roger E Koeppe, Amitabha Chattopadhyay

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of fluorescence, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Sreetama PalCSIR-Indian Institute of Chemical Technology, Uppal Road, Hyderabad, 500 007, India.
Roger E KoeppeDepartment of Chemistry and Biochemistry, University of Arkansas, Fayetteville, AR, 72701, USA.
Amitabha ChattopadhyayAcademy of Scientific and Innovative Research, Ghaziabad, India. amit@ccmb.res.in.
Academy of Scientific and Innovative Research · INIndian Institute of Chemical Technology · INUniversity of Arkansas at Fayetteville · US

Funding

United States National Science Foundation MCB 1713242
6 · The paper itself

Abstract

WALPs are prototypical, α-helical transmembrane peptides that represent a consensus sequence for transmembrane segments of integral membrane proteins and serve as excellent models for exploring peptide-lipid interactions and hydrophobic mismatch in membranes. Importantly, the WALP peptides are in direct contact with the lipids. They consist of a central stretch of alternating hydrophobic alanine and leucine residues capped at both ends by tryptophans. In this work, we employ wavelength-selective fluorescence approaches to explore the intrinsic fluorescence of tryptophan residues in WALP23 in 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) membranes. Our results show that the four tryptophan residues in WALP23 exhibit an average red edge excitation shift (REES) of 6 nm, implying their localization at the membrane interface, characterized by a restricted microenvironment. This result is supported by fluorescence anisotropy and lifetime measurements as a function of wavelength displayed by WALP23 tryptophans in POPC membranes. These results provide a new approach based on intrinsic fluorescence of interfacial tryptophans to address protein-lipid interaction and hydrophobic mismatch.

Indexed as

Amino Acid SequenceMembrane ProteinsPeptidesPhosphatidylcholinesProtein Structure, SecondarySpectrometry, FluorescenceTryptophan1-palmitoyl-2-oleoylphosphatidylcholineMembrane ProteinsPeptidesPhosphatidylcholinesTryptophanHydrophobic mismatchInterfacial tryptophan anchorREESWALP

Identifiers

PMID30225736
OpenAlexW2891232957

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.