Evidence map›Paper›PMID 30225583›Full record

ArticleMolecular biology reports2018

Development of a novel anti-HER2 scFv by ribosome display and in silico evaluation of its 3D structure and interaction with HER2, alone and after fusion to LAMP2B.

Fatemeh Salimi, Mehdi Forouzandeh Moghadam, Masoumeh Rajabibazl

Abstract read
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In one paragraph

Article in Molecular biology reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. In Vitro Selection of Antibodies by Ribosome Display.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Strategies to functionalize extracellular vesicles against HER2 for anticancer activity.Extracellular vesicles and circulating nucleic acids · 2022
    Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Fatemeh SalimiDepartment of Medical Biotechnology, Faculty of Medical Sciences, Tarbiat Modares University, Nasr Bridge, P.O. Box 14115-331, Tehran, Iran.
Mehdi Forouzandeh MoghadamDepartment of Medical Biotechnology, Faculty of Medical Sciences, Tarbiat Modares University, Nasr Bridge, P.O. Box 14115-331, Tehran, Iran. foroz@modares.ac.ir.ORCID http://orcid.org/0000-0001-9341-8550
Masoumeh RajabibazlDepartment of Clinical Biochemistry, Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.ORCID http://orcid.org/0000-0002-9720-5904
Tarbiat Modares University · IRShahid Beheshti University of Medical Sciences · IR

Funding

Tarbiat Modares University (IR) 14033
6 · The paper itself

Abstract

HER2 is a member of epidermal factor receptor (EGFR) family which is overexpressed in breast cancer, ovarian cancer and gastric cancer. Development of new binders for cancer cell surface receptors and expressing them at the surface of exosomes would be a great approach in targeted cancer therapy. We found a high affinity scFv against HER2 using ribosome display with the approach of applying it as a targeting moiety at the surface of exosomes by fusion to lysosomal associated membrane protein 2B (LAMP2B). We also provide some structural information about the ribosome display selected scFv (scFv HFS2) through modeling the 3D structure of scFv HFS2 using RosettaAntibody and docked it at the extracellular domain of HER2. We also evaluated the structure of scFv HFS2 and its binding to HER2 after fusion to LAMP2B. Our results showed no significant change in 3D structure of scFv HFS2 when fused to LAMP2B (RMSD 1.3) and interaction analysis represented that scFv HFS2 binds HER2 domain III before and after fusion to LAMP2B. Although binding domain of scFv HFS2 on HER2 was the same at both state, residues involved in their interactions showed significant differences as it was probably due to the spatial hindrance of scFv HFS2 when fused to LAMP2B through a short linker and it should be considered before proceeding to experiment.

Indexed as

AnimalsBreast NeoplasmsCell Line, TumorErb-b2 Receptor Tyrosine KinasesFemaleFlow CytometryHumansLysosomal-Associated Membrane Protein 2MiceMice, Inbred BALB COvarian NeoplasmsProtein EngineeringRibosomesSingle-Chain AntibodiesERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesLAMP2 protein, humanLysosomal-Associated Membrane Protein 2Single-Chain Antibodies3D modelingHER2LAMP2BRibosome displayScFv HFS2

Identifiers

PMID30225583
OpenAlexW2892332495

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.