Evidence map›Paper›PMID 30225203›Full record

ArticleMethodsX2018

Efficient enrichment cloning of TAL effector genes from

T T Tran, H Doucouré, M Hutin, L M Jaimes Niño, B Szurek, S Cunnac, R Koebnik

Open access · goldAbstract read
In one paragraph

Article in MethodsX, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

T T TranIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
H DoucouréIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
M HutinIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
L M Jaimes NiñoUniversidad de los Andes, Bogotá, Colombia.
B SzurekIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
S CunnacIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
R KoebnikIRD, Cirad, Univ. Montpellier, IPME, Montpellier, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRUniversidad de Los Andes · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many plant-pathogenic xanthomonads use a type III secretion system to translocate Transcription Activator-Like (TAL) effectors into eukaryotic host cells where they act as transcription factors. Target genes are induced upon binding of a TAL effector to double-stranded DNA in a sequence-specific manner. DNA binding is governed by a highly repetitive protein domain, which consists of an array of nearly identical repeats of ca. 102 base pairs. Many species and pathovars of

Indexed as

Bacterial leaf blightBacterial leaf streakEnrichment cloningRiceTAL effectorTAL fishingTALomeType III effectorType III secretionXanthomonas

Identifiers

PMID30225203
PMCPMC6138780
OpenAlexW2949875485

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.