Evidence map›Paper›PMID 30224337›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2019

USP7 Cooperates with NOTCH1 to Drive the Oncogenic Transcriptional Program in T-Cell Leukemia.

Qi Jin, Carlos A Martinez, Kelly M Arcipowski, Yixing Zhu, Blanca T Gutierrez-Diaz, Kenneth K Wang, Megan R Johnson, Andrew G Volk, Feng Wang, Jian Wu and 37 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Notch Inhibitors and BH3 Mimetics in T-Cell Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2024
    Review
  17. Article
  18. Article
  19. Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

47 authors at 7 institutions in 5 countries.

Qi Jin *Department of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.ORCID 0000-0001-8872-9266
Carlos A Martinez *Department of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Kelly M Arcipowski *Department of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Yixing ZhuDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Blanca T Gutierrez-DiazDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Kenneth K WangMaster of Science in Biotechnology Graduate Program, Northwestern University, Evanston, Illinois.
Megan R JohnsonDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Andrew G VolkDivision of Hematology/Oncology, Department of Medicine, Northwestern University, Chicago, Illinois.
Feng WangProgenra Inc., Malvern, Pennsylvania.
Jian WuProgenra Inc., Malvern, Pennsylvania.
Charles GroveProgenra Inc., Malvern, Pennsylvania.
Hui WangProgenra Inc., Malvern, Pennsylvania.
Ivan SokirniyProgenra Inc., Malvern, Pennsylvania.
Paul M ThomasProteomics Center of Excellence, Northwestern University, Evanston, Illinois.
Young Ah GooDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Nebiyu A AbshiruProteomics Center of Excellence, Northwestern University, Evanston, Illinois.
Nobuko HijiyaAnn & Robert H. Lurie Children's Hospital, Northwestern University, Chicago, Illinois.
Sofie PeirsCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0001-7036-1053
Niels VandammeCancer Research Institute Ghent (CRIG), Ghent, Belgium.
Geert BerxCancer Research Institute Ghent (CRIG), Ghent, Belgium.
Steven GoosensCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-5693-8570
Stacy A MarshallDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Emily J RendlemanDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.ORCID 0000-0002-0125-3718
Yoh-Hei TakahashiDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Lu WangDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Radhika RawatDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Elizabeth T BartomDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Clayton K CollingsDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.ORCID 0000-0002-3471-2132
Pieter Van VlierbergheCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Alexandros StrikoudisDepartment of Pathology, New York University, New York, New York.
Stephen KellyDepartment of Pathology, New York University, New York, New York.
Beatrix UeberheideDepartment of Biochemistry and Molecular Pharmacology, New York University, New York, New York.
Christine MantisCenter for Developmental Therapeutics, Northwestern University, Evanston, Illinois.
Irawati KandelaCenter for Developmental Therapeutics, Northwestern University, Evanston, Illinois.
Jean-Pierre BourquinUniversity Children's Hospital, Division of Pediatric Oncology, University of Zurich, Switzerland.
Beat BornhauserUniversity Children's Hospital, Division of Pediatric Oncology, University of Zurich, Switzerland.
Valentina SerafinOncohematology Laboratory, Department of Woman's and Child's Health, University of Padova, Padova, Italy.
Silvia BresolinOncohematology Laboratory, Department of Woman's and Child's Health, University of Padova, Padova, Italy.
Maddalena PaganinOncohematology Laboratory, Department of Woman's and Child's Health, University of Padova, Padova, Italy.
Benedetta AccordiOncohematology Laboratory, Department of Woman's and Child's Health, University of Padova, Padova, Italy.
Giuseppe BassoOncohematology Laboratory, Department of Woman's and Child's Health, University of Padova, Padova, Italy.
Neil L KelleherDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Joseph WeinstockProgenra Inc., Malvern, Pennsylvania.
Suresh KumarProgenra Inc., Malvern, Pennsylvania.
John D CrispinoDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Ali ShilatifardDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois.
Panagiotis NtziachristosDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, Illinois. Panos.ntz@northwestern.edu.
Northwestern University · USProgenra (United States) · USGhent University Hospital · BEUniversity of Padua · ITNew York University · USUniversity Children's Hospital Zurich · CHLurie Children's Hospital · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008152 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ARDEHALI, HOSSEIN · 1987 to 2021
$24.0M
TR&D 7: Cell Specific ProteomicsP41GM108569 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2015 to 2024
$13.6M
Medical Scientist Training ProgramT32GM144295 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ALAN R HAUSER · 2022 to 2026
$9.1M
TRAINING PROGRAM IN ONCOGENESIS &DEVELOPMENT BIOLOGYT32CA080621 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI EKLUND, ELIZABETH ANN · 2001 to 2018
$4.1M
Bioinformatics Analysis of Next Generation Sequencing Data from Cancer CellsR50CA221848 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Elizabeth Thomas Bartom · 2017 to 2026
$1.8M
Exploring a new therapeutic approach through targeting epigenetic enzymes in ALLR00CA188293 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI NTZIACHRISTOS, PANAGIOTIS · 2015 to 2017
$747k
Therapeutic targeting of demethylation-deubiquitination axis in acute leukemiaR01CA248770 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI NTZIACHRISTOS, PANAGIOTIS · 2020 to 2021
$726k
Single-Base Resolution Method of 5-hmC in BiologyR43HG006634 · NHGRI · CINLANIAN BIOTECHNOLOGY, INC. · PI CHANG, SHUANG · 2012 to 2012
$212k
NCI NIH HHS P30 CA060553NCI NIH HHS R00 CA188293NCI NIH HHS R01 CA248770NCI NIH HHS R50 CA221848NCI NIH HHS T32 CA080621NHGRI NIH HHS R43 HG006634NIGMS NIH HHS P41 GM108569NIGMS NIH HHS T32 GM008152NIGMS NIH HHS T32 GM144295
6 · The paper itself

Abstract

purposeT-cell acute lymphoblastic leukemia (T-ALL) is an aggressive disease, affecting children and adults. Chemotherapy treatments show high response rates but have debilitating effects and carry risk of relapse. Previous work implicated NOTCH1 and other oncogenes. However, direct inhibition of these pathways affects healthy tissues and cancer alike. Our goal in this work has been to identify enzymes active in T-ALL whose activity could be targeted for therapeutic purposes. EXPERIMENTAL

designTo identify and characterize new NOTCH1 druggable partners in T-ALL, we coupled studies of the NOTCH1 interactome to expression analysis and a series of functional analyses in cell lines, patient samples, and xenograft models.

resultsWe demonstrate that ubiquitin-specific protease 7 (USP7) interacts with NOTCH1 and controls leukemia growth by stabilizing the levels of NOTCH1 and JMJD3 histone demethylase.

conclusionsThese results provide a new model for USP7 deubiquitinase activity through recruitment to oncogenic chromatin loci and regulation of both oncogenic transcription factors and chromatin marks to promote leukemia. Our studies also show that targeting USP7 inhibition could be a therapeutic strategy in aggressive leukemia.

Indexed as

AnimalsCarcinogenesisCell ProliferationGene Expression Regulation, NeoplasticGenetic TherapyHumansJumonji Domain-Containing Histone DemethylasesJurkat CellsLeukemia, T-CellMiceReceptor, Notch1Signal TransductionUbiquitin-Specific Peptidase 7Xenograft Model Antitumor AssaysJumonji Domain-Containing Histone DemethylasesKDM6B protein, humanNOTCH1 protein, humanReceptor, Notch1Ubiquitin-Specific Peptidase 7USP7 protein, human

Identifiers

PMID30224337
PMCPMC6320313
OpenAlexW2793031031

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.