Evidence map›Paper›PMID 30223704›Full record

ArticlePrion2018

A simple in vitro assay for assessing the efficacy, mechanisms and kinetics of anti-prion fibril compounds.

Carol L Ladner-Keay, Li Ross, Rolando Perez-Pineiro, Lun Zhang, Trent C Bjorndahl, Neil Cashman, David S Wishart

Open access · goldAbstract read
In one paragraph

Article in Prion, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Adaptation of the protein misfolding cyclic amplification (PMCA) technique for the screening of anti-prion compounds.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  3. Article
  4. Review
  5. Neural regeneration research · 2021
    Review
  6. Review
  7. Review
  8. Bile Acid Signaling in Neurodegenerative and Neurological Disorders.International journal of molecular sciences · 2020
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Carol L Ladner-Keaya Department of Biological Sciences , University of Alberta , Edmonton , Canada.ORCID 0000-0003-0273-713X
Li Rossc Brain Research Centre , University of British Columbia , Vancouver , Canada.
Rolando Perez-Pineiroa Department of Biological Sciences , University of Alberta , Edmonton , Canada.ORCID 0000-0001-6107-1898
Lun Zhanga Department of Biological Sciences , University of Alberta , Edmonton , Canada.
Trent C Bjorndahla Department of Biological Sciences , University of Alberta , Edmonton , Canada.
Neil Cashmanc Brain Research Centre , University of British Columbia , Vancouver , Canada.
David S Wisharta Department of Biological Sciences , University of Alberta , Edmonton , Canada.ORCID 0000-0002-3207-2434
University of Alberta · CAUniversity of British Columbia · CA

Funding

CIHR
6 · The paper itself

Abstract

Prion diseases are caused by the conversion of normal cellular prion proteins (PrP) into lethal prion aggregates. These prion aggregates are composed of proteinase K (PK) resistant fibrils and comparatively PK-sensitive oligomers. Currently there are no anti-prion pharmaceuticals available to treat or prevent prion disease. Methods of discovering anti-prion molecules rely primarily on relatively complex cell-based, tissue slice or animal-model assays that measure the effects of small molecules on the formation of PK-resistant prion fibrils. These assays are difficult to perform and do not detect the compounds that directly inhibit oligomer formation or alter prion conversion kinetics. We have developed a simple cell-free method to characterize the impact of anti-prion fibril compounds on both the oligomer and fibril formation. In particular, this assay uses shaking-induced conversion (ShIC) of recombinant PrP in a 96-well format and resolution enhanced native acidic gel electrophoresis (RENAGE) to generate, assess and detect PrP fibrils in a high throughput fashion. The end-point PrP fibrils from this assay can be further characterized by PK analysis and negative stain transmission electron microscopy (TEM). This cell-free, gel-based assay generates metrics to assess anti-prion fibril efficacy and kinetics. To demonstrate its utility, we characterized the action of seven well-known anti-prion molecules: Congo red, curcumin, GN8, quinacrine, chloropromazine, tetracycline, and TUDCA (taurourspdeoxycholic acid), as well as four suspected anti-prion compounds: trans-resveratrol, rosmarinic acid, myricetin and ferulic acid. These findings suggest that this in vitro assay could be useful in identifying and comprehensively assessing novel anti-prion fibril compounds. Abbreviations: PrP, prion protein; PK, proteinase K; ShIC, shaking-induced conversion; RENAGE, resolution enhanced native acidic gel electrophoresis; TEM, transmission electron microscopy; TUDCA, taurourspdeoxycholic acid; BSE, bovine spongiform encephalopathy; CWD, chronic wasting disease; CJD, Creutzfeldt Jakob disease; GSS, Gerstmann-Sträussler-Scheinker syndrome; FFI, fatal familial insomnia; PrP

Indexed as

Cell-Free SystemAnimalsCell Line, TumorCinnamatesCoumaric AcidsDepsidesElectrophoresisEndopeptidase KFlavonoidsHumansKineticsMicePrion ProteinsProtein AggregatesProtein FoldingRecombinant ProteinsCinnamatesCoumaric AcidsDepsidesEndopeptidase Kferulic acidFlavonoidsmyricetinPrion ProteinsProtein AggregatesRecombinant ProteinsResveratrolRosmarinic Acidanti-prionbeta oligomerconversionfibrilPrion proteinprotein misfolding

Identifiers

PMID30223704
PMCPMC6277192
OpenAlexW2892342950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.