Evidence map›Paper›PMID 30222246›Full record

ArticleThe FEBS journal2018

The structure of INI1/hSNF5 RPT1 and its interactions with the c-MYC:MAX heterodimer provide insights into the interplay between MYC and the SWI/SNF chromatin remodeling complex.

Susan Sammak, Mark D Allen, Najoua Hamdani, Mark Bycroft, Giovanna Zinzalla

Open access · hybridAbstract read
In one paragraph

Article in The FEBS journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. MYC: a complex problem.Trends in cell biology · 2023
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Biophysical and Structural Methods to Study the bHLHZip Region of Human c-MYC.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  13. MYC protein stability is negatively regulated by BRD4.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Susan SammakMicrobiology, Tumor and Cell Biology (MTC) Department, Karolinska Institutet, Stockholm, Sweden.
Mark D AllenMRC Laboratory of Molecular Biology, Cambridge, UK.
Najoua HamdaniMicrobiology, Tumor and Cell Biology (MTC) Department, Karolinska Institutet, Stockholm, Sweden.
Mark BycroftMRC Laboratory of Molecular Biology, Cambridge, UK.
Giovanna ZinzallaMicrobiology, Tumor and Cell Biology (MTC) Department, Karolinska Institutet, Stockholm, Sweden.
Karolinska Institutet · SEMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105459896
6 · The paper itself

Abstract

c-MYC and the SWI/SNF chromatin remodeling complex act as master regulators of transcription, and play a key role in human cancer. Although they are known to interact, the molecular details of their interaction are lacking. We have determined the structure of the RPT1 region of the INI1/hSNF5/BAF47/SMARCB1 subunit of the SWI/SNF complex that acts as a c-MYC-binding domain, and have localized the interaction regions on both INI1 and on the c-MYC:MAX heterodimer. c-MYC interacts with a highly conserved groove on INI1, while INI1 binds to the c-MYC helix-loop-helix region. The binding site overlaps with the c-MYC DNA-binding region, and we show that binding of INI1 and E-box DNA to c-MYC:MAX are mutually exclusive.

Indexed as

Chromosomal Proteins, Non-HistoneTranscription FactorsAmino Acid SequenceBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBinding SitesCrystallography, X-RayHumansModels, MolecularProtein ConformationProtein DomainsProtein MultimerizationProto-Oncogene Proteins c-mycSMARCB1 ProteinBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsChromosomal Proteins, Non-HistoneMAX protein, humanMYC protein, humanProto-Oncogene Proteins c-mycSMARCB1 ProteinSMARCB1 protein, humanSWI-SNF-B chromatin-remodeling complexTranscription FactorsBAF/PBAF complexesINI1/hSNF5/BAF47/SMARCB1 subunitMYCprotein-protein interactionstranscription factors

Identifiers

PMID30222246
PMCPMC6398391
OpenAlexW2890747945

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.