Evidence map›Paper›PMID 30221936›Full record

ArticleJournal of the American Chemical Society2018

Molecular Recognition of Methionine-Terminated Peptides by Cucurbit[8]uril.

Zoheb Hirani, Hailey F Taylor, Emily F Babcock, Andrew T Bockus, C Daniel Varnado, Christopher W Bielawski, Adam R Urbach

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. Review
  3. Protein Recognition and Assembly by a Phosphocavitand.Journal of the American Chemical Society · 2025
    Article
  4. Review
  5. Article
  6. Making and Breaking Supramolecular Synthons for Modular Protein Frameworks.Chemistry (Weinheim an der Bergstrasse, Germany) · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Biomimetic Entropy-Dominant Molecular Hinges with Picomolar Affinity.Journal of the American Chemical Society · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. A fluorescent probe for detection of HgBeilstein journal of organic chemistry · 2023
    Article
  20. Cucurbit[Frontiers in chemistry · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Zoheb HiraniDepartment of Chemistry , Trinity University , 1 Trinity Place , San Antonio , Texas 78212 , United States.
Hailey F TaylorDepartment of Chemistry , Trinity University , 1 Trinity Place , San Antonio , Texas 78212 , United States.
Emily F BabcockDepartment of Chemistry , Trinity University , 1 Trinity Place , San Antonio , Texas 78212 , United States.
Andrew T BockusDepartment of Chemistry , Trinity University , 1 Trinity Place , San Antonio , Texas 78212 , United States.
C Daniel VarnadoCenter for Multidimensional Carbon Materials (CMCM) , Institute for Basic Science (IBS) , 50 UNIST-gil , Ulsan 44919 , Republic of Korea.
Christopher W BielawskiCenter for Multidimensional Carbon Materials (CMCM) , Institute for Basic Science (IBS) , 50 UNIST-gil , Ulsan 44919 , Republic of Korea.
Adam R UrbachDepartment of Chemistry , Trinity University , 1 Trinity Place , San Antonio , Texas 78212 , United States.ORCID 0000-0003-3426-4760
Trinity University · USInstitute for Basic Science · KR

Funding

Supramolecular Strategies for the Controlled Release of Protein DrugsR15GM126511 · NIGMS · TRINITY UNIVERSITY · PI URBACH, ADAM ROBERT · 2017 to 2017
$400k
NIGMS NIH HHS R15 GM126511
6 · The paper itself

Abstract

This Article describes the molecular recognition of peptides containing an N-terminal methionine (Met) by the synthetic receptor cucurbit[8]uril (Q8) in aqueous solution and with submicromolar affinity. Prior work established that Q8 binds with high affinity to peptides containing aromatic amino acids, either by simultaneous binding of two aromatic residues, one from each of two different peptides, or by simultaneous binding of an aromatic residue and its immediate neighbor on the same peptide. The additional binding interface of two neighboring residues suggested the possibility of targeting nonaromatic peptides, which have thus far bound only weakly to synthetic receptors. A peptide library designed to test this hypothesis was synthesized and screened qualitatively for Q8 binding using a fluorescent indicator displacement assay. The large fluorescence response observed for several Met-terminated peptides suggested strong binding, which was confirmed quantitatively by the determination of submicromolar equilibrium dissociation constant values for Q8 binding to MLA, MYA, and MFA using isothermal titration calorimetry (ITC). This discovery of high affinity binding to Met-terminated peptides and, more generally, to nonaromatic peptides prompted a detailed investigation of the determinants of binding in this system using ITC, electrospray ionization mass spectrometry, and

Indexed as

Amino Acid SequenceBridged-Ring CompoundsCucurbit(n)urilsImidazolesMacrocyclic CompoundsMethioninePeptide LibraryPeptidesProtein BindingThermodynamicsBridged-Ring Compoundscucurbit(8)urilCucurbit(n)urilsImidazolesMacrocyclic CompoundsMethioninePeptide LibraryPeptides

Identifiers

PMID30221936
PMCPMC6312855
OpenAlexW2889718689

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.