Evidence map›Paper›PMID 30221733›Full record

ArticleMolecular medicine reports2018

Deletion of poly(ADP‑ribose) polymerase-1 changes the composition of the microbiome in the gut.

András Vida, Gábor Kardos, Tünde Kovács, Balázs L Bodrogi, Péter Bai

Abstract read
In one paragraph

Article in Molecular medicine reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
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  7. Article
  8. The Microbiome as a Component of the Tumor Microenvironment.Advances in experimental medicine and biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

András VidaDepartment of Medical Chemistry, Faculty of Medicine, University of Debrecen, H‑4032 Debrecen, Hungary.
Gábor KardosDepartment of Microbiology, Faculty of Medicine, University of Debrecen, H‑4032 Debrecen, Hungary.
Tünde KovácsDepartment of Medical Chemistry, Faculty of Medicine, University of Debrecen, H‑4032 Debrecen, Hungary.
Balázs L BodrogiDepartment of Urology, Borsod‑Abaúj‑Zemplén County Hospital and University Teaching Hospital, H‑3525 Miskolc, Hungary.
Péter BaiDepartment of Medical Chemistry, Faculty of Medicine, University of Debrecen, H‑4032 Debrecen, Hungary.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poly(adenosine diphosphate‑ribose) polymerase (PARP)‑1 is the prototypical PARP enzyme well known for its role in DNA repair and as a pro‑inflammatory protein. Since PARP1 is an important co‑factor of several other pro‑inflammatory proteins, in the present study the possible changes in microbial flora of PARP1 knockout mice were investigated. Samples from the duodenum, cecum and feces from wild type and PARP1 knockout C57BL/6J male mice were collected and 16S ribosomal RNA genes were sequenced. Based on the sequencing results, the microbiome and compared samples throughout the lower part of the gastrointestinal system were reconstructed. The present results demonstrated that the lack of PARP1 enzyme only disturbed the microbial flora of the duodenum, where the biodiversity increased in the knockout animals on the species level but decreased on the order level. The most prominent change was the overwhelming abundance of the family Porphyromonadaceae in the duodenum of PARP1‑/‑ animals, which disappeared in the cecum and feces where families were spread out more evenly than in the wild type animals. The findings of the present study may improve current understanding of the role of PARP1 in chronic inflammatory diseases.

Indexed as

BiodiversityGastrointestinal MicrobiomeAnimalsGenetic Association StudiesGenotypeHost-Pathogen InteractionsMiceMice, KnockoutPoly (ADP-Ribose) Polymerase-1PARP1 protein, humanPoly (ADP-Ribose) Polymerase-1

Identifiers

PMID30221733
PMCPMC6172391

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.