Evidence map›Paper›PMID 30220095›Full record

ArticlePlant biotechnology journal2019

Zinc finger nuclease-mediated targeting of multiple transgenes to an endogenous soybean genomic locus via non-homologous end joining.

Nicholas D Bonawitz, W Michael Ainley, Asuka Itaya, Sivarama R Chennareddy, Tobias Cicak, Katherine Effinger, Ke Jiang, Tejinder Kumar Mall, Pradeep Reddy Marri, J Pon Samuel and 8 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
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  6. Article
  7. Technological Development and Application of Plant Genetic Transformation.International journal of molecular sciences · 2023
    Review
  8. Review
  9. Review
  10. Review
  11. Target Lines forInternational journal of molecular sciences · 2022
    Article
  12. Review
  13. Target lines for recombinase-mediated gene stacking in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Targeted DNA insertion in plants.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Nicholas D BonawitzDow AgroSciences LLC, Indianapolis, IN, USA.ORCID 0000-0002-7441-6215
W Michael AinleyDow AgroSciences LLC, Indianapolis, IN, USA.
Asuka ItayaAgriculture and Agri-Food Canada, Ottawa, ON, Canada.
Sivarama R ChennareddyDow AgroSciences LLC, Indianapolis, IN, USA.
Tobias CicakDow AgroSciences LLC, Indianapolis, IN, USA.
Katherine EffingerDow AgroSciences LLC, Indianapolis, IN, USA.
Ke JiangDow AgroSciences LLC, Indianapolis, IN, USA.
Tejinder Kumar MallDow AgroSciences LLC, Indianapolis, IN, USA.
Pradeep Reddy MarriDow AgroSciences LLC, Indianapolis, IN, USA.
J Pon SamuelDow AgroSciences LLC, Indianapolis, IN, USA.
Nagesh SardesaiDow AgroSciences LLC, Indianapolis, IN, USA.
Matthew SimpsonDow AgroSciences LLC, Indianapolis, IN, USA.
Otto FolkertsDow AgroSciences LLC, Indianapolis, IN, USA.
Rodrigo SarriaDow AgroSciences LLC, Indianapolis, IN, USA.
Steven R WebbDow AgroSciences LLC, Indianapolis, IN, USA.
Delkin O GonzalezDow AgroSciences LLC, Indianapolis, IN, USA.
Daina H SimmondsAgriculture and Agri-Food Canada, Ottawa, ON, Canada.
Dayakar R PareddyDow AgroSciences LLC, Indianapolis, IN, USA.
Agriculture and Agri-Food Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Emerging genome editing technologies hold great promise for the improvement of agricultural crops. Several related genome editing methods currently in development utilize engineered, sequence-specific endonucleases to generate DNA double strand breaks (DSBs) at user-specified genomic loci. These DSBs subsequently result in small insertions/deletions (indels), base substitutions or incorporation of exogenous donor sequences at the target site, depending on the application. Targeted mutagenesis in soybean (Glycine max) via non-homologous end joining (NHEJ)-mediated repair of such DSBs has been previously demonstrated with multiple nucleases, as has homology-directed repair (HDR)-mediated integration of a single transgene into target endogenous soybean loci using CRISPR/Cas9. Here we report targeted integration of multiple transgenes into a single soybean locus using a zinc finger nuclease (ZFN). First, we demonstrate targeted integration of biolistically delivered DNA via either HDR or NHEJ to the FATTY ACID DESATURASE 2-1a (FAD2-1a) locus of embryogenic cells in tissue culture. We then describe ZFN- and NHEJ-mediated, targeted integration of two different multigene donors to the FAD2-1a locus of immature embryos. The largest donor delivered was 16.2 kb, carried four transgenes, and was successfully transmitted to T

Indexed as

DNA End-Joining RepairGene EditingGene TargetingDNA Breaks, Double-StrandedGlycine maxPlant ProteinsPlants, Genetically ModifiedPlant Somatic Embryogenesis TechniquesRecombinational DNA RepairTransformation, GeneticTransgenesZinc Finger NucleasesPlant ProteinsZinc Finger Nucleasesbiolistic transformationgene targetinggenome editingsomatic embryogenesissoybeanzinc finger nuclease

Identifiers

PMID30220095
PMCPMC6419576
OpenAlexW2891365275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.