Evidence map›Paper›PMID 30219899›Full record

ArticleCardiovascular research2019

The 4q25 variant rs13143308T links risk of atrial fibrillation to defective calcium homoeostasis.

Adela Herraiz-Martínez, Anna Llach, Carmen Tarifa, Jorge Gandía, Verónica Jiménez-Sabado, Estefanía Lozano-Velasco, Selma A Serra, Alexander Vallmitjana, Eduardo Vázquez Ruiz de Castroviejo, Raúl Benítez and 5 more

Open access · greenAbstract read
In one paragraph

Article in Cardiovascular research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Transforming atrial fibrillation management by targeting comorbidities and reducing atrial fibrillation burden: the 10th AFNET/EHRA consensus conference.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2025
    Article
  3. Single-Nucleotide Polymorphisms,International journal of molecular sciences · 2025
    Review
  4. Article
  5. Article
  6. Decreased METTL3 in atrial myocytes promotes atrial fibrillation.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2025
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Expression and Impact of Adenosine AInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Atrial fibrillation and atrial cardiomyopathies.Journal of cardiovascular electrophysiology · 2021
    Review
  17. Review
  18. In Silico Assessment of Class I Antiarrhythmic Drug Effects onInternational journal of molecular sciences · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Adela Herraiz-MartínezBiomedical Research Institute Barcelona CSIC-IIBB Antiguo Hospital de la Santa Creu i Sant Pau, Pabellon 11, St Antoni Ma Claret 167, Barcelona, Spain.
Anna LlachIIB Sant Pau, Hospital de la Santa Creu i Sant Pau, Barcelona, Spain.
Carmen TarifaBiomedical Research Institute Barcelona CSIC-IIBB Antiguo Hospital de la Santa Creu i Sant Pau, Pabellon 11, St Antoni Ma Claret 167, Barcelona, Spain.
Jorge GandíaBiomedical Research Institute Barcelona CSIC-IIBB Antiguo Hospital de la Santa Creu i Sant Pau, Pabellon 11, St Antoni Ma Claret 167, Barcelona, Spain.
Verónica Jiménez-SabadoCIBERCV, Spain.
Estefanía Lozano-VelascoDepartment of Experimental Biology, University of Jaén, Spain.
Selma A SerraBiomedical Research Institute Barcelona CSIC-IIBB Antiguo Hospital de la Santa Creu i Sant Pau, Pabellon 11, St Antoni Ma Claret 167, Barcelona, Spain.
Alexander VallmitjanaDepartment of Automatic Control, Universitat Politècnica de Catalunya, Barcelona, Spain.
Eduardo Vázquez Ruiz de CastroviejoCardiology Unit, Regional Hospital Ciudad de Jáen, Spain.
Raúl BenítezDepartment of Automatic Control, Universitat Politècnica de Catalunya, Barcelona, Spain.
Amelia AranegaDepartment of Experimental Biology, University of Jaén, Spain.
Christian Muñoz-GuijosaDepartment of Cardiac Surgery, Hospital de la Santa Creu i Sant Pau, Barcelona, Spain.
Diego FrancoDepartment of Experimental Biology, University of Jaén, Spain.
Juan CincaIIB Sant Pau, Hospital de la Santa Creu i Sant Pau, Barcelona, Spain.
Leif Hove-MadsenBiomedical Research Institute Barcelona CSIC-IIBB Antiguo Hospital de la Santa Creu i Sant Pau, Pabellon 11, St Antoni Ma Claret 167, Barcelona, Spain.
Hospital de Sant Pau · ESUniversidad de Jaén · ESCentro de Investigación en Red en Enfermedades Cardiovasculares · ESUniversitat Politècnica de Catalunya · ESComplejo Hospitalario de Jaén · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsSingle nucleotide polymorphisms on chromosome 4q25 have been associated with risk of atrial fibrillation (AF) but the exiguous knowledge of the mechanistic links between these risk variants and underlying electrophysiological alterations hampers their clinical utility. Here, we tested the hypothesis that 4q25 risk variants cause alterations in the intracellular calcium homoeostasis that predispose to spontaneous electrical activity. METHODS AND

resultsWestern blotting, confocal calcium imaging, and patch-clamp techniques were used to identify mechanisms linking the 4q25 risk variants rs2200733T and rs13143308T to defects in the calcium homoeostasis in human atrial myocytes. Our findings revealed that the rs13143308T variant was more frequent in patients with AF and that myocytes from carriers of this variant had a significantly higher density of calcium sparks (14.1 ± 4.5 vs. 3.1 ± 1.3 events/min, P = 0.02), frequency of transient inward currents (ITI) (1.33 ± 0.24 vs. 0.26 ± 0.09 events/min, P < 0.001) and incidence of spontaneous membrane depolarizations (1.22 ± 0.26 vs. 0.56 ± 0.17 events/min, P = 0.001) than myocytes from patients with the normal rs13143308G variant. These alterations were linked to higher sarcoplasmic reticulum calcium loading (10.2 ± 1.4 vs. 7.3 ± 0.5 amol/pF, P = 0.01), SERCA2 expression (1.37 ± 0.13 fold, P = 0.03), and RyR2 phosphorylation at ser2808 (0.67 ± 0.08 vs. 0.47 ± 0.03, P = 0.01) but not at ser2814 (0.28 ± 0.14 vs. 0.31 ± 0.14, P = 0.61) in patients carrying the rs13143308T risk variant. Furthermore, the presence of a risk variant or AF independently increased the ITI frequency and the increase in the ITI frequency observed in carriers of the risk variants was exacerbated in those with AF. By contrast, the presence of a risk variant did not affect the amplitude or properties of the L-type calcium current in patients with or without AF.

conclusionsHere, we identify the 4q25 variant rs13143308T as a genetic risk marker for AF, specifically associated with excessive calcium release and spontaneous electrical activity linked to increased SERCA2 expression and RyR2 phosphorylation.

Indexed as

Chromosomes, Human, Pair 4Polymorphism, Single NucleotideAction PotentialsAgedAtrial FibrillationCalciumCalcium SignalingCase-Control StudiesFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHeart AtriaHeart RateHomeostasisHumansMaleATP2A2 protein, humanCalciumRyanodine Receptor Calcium Release ChannelRyR2 protein, humanSarcoplasmic Reticulum Calcium-Transporting ATPasesHuman atrial myocytesRyanodine receptorSarcoplasmic reticulum calcium releaseSingle nucleotide polymorphismsSpontaneous electrical activity

Identifiers

PMID30219899
PMCPMC6383060
OpenAlexW2892014320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.