Evidence map›Paper›PMID 30218368›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2018

Experimental Analysis of Imprinted Mouse X-Chromosome Inactivation.

Marissa Cloutier, Clair Harris, Srimonta Gayen, Emily Maclary, Sundeep Kalantry

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Genome research · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Marissa CloutierDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
Clair HarrisDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
Srimonta GayenDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
Emily MaclaryDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
Sundeep KalantryDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA. Kalantry@umich.edu.
University of Michigan–Ann Arbor · USUniversity of Utah · US

Funding

PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
X-chromosome Inactivation Catalyzed by Genes That Escape X-inactivationR01GM124571 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SUNDEEP KALANTRY · 2017 to 2026
$3.2M
Investigating Novel Modes of Epigenetic Regulation Through the Polycomb GroupR01HD095463 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KALANTRY, SUNDEEP · 2018 to 2022
$2.4M
Initiation of Epigenetic Transcriptional RegulationDP2OD008646 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KALANTRY, SUNDEEP · 2011 to 2011
$2.3M
Career Training in Reproductive BiologyT32HD079342 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Suzanne M MOENTER · 2014 to 2026
$2.3M
Mechanistic Analysis of Parent-of-Origin-Specific Gene Expression in the PlacentaF31HD080280 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MACLARY, EMILY TOMPKINS · 2014 to 2015
$67k
NICHD NIH HHS F31 HD080280NICHD NIH HHS R01 HD095463NICHD NIH HHS T32 HD079342NIGMS NIH HHS R01 GM124571NIGMS NIH HHS T32 GM007544NIH HHS DP2 OD008646
6 · The paper itself

Abstract

X-chromosome inactivation is a dosage compensation mechanism that equalizes X-linked gene expression between male and female mammals through the transcriptional silencing of most genes on one of the two X-chromosomes in females. With a few key exceptions, once the X-chromosome is inactivated replicated copies of that X-chromosome are maintained as inactive in all descendant cells. X-inactivation is therefore a paradigm of epigenetic inheritance. Imprinted X-inactivation is a specialized form of X-inactivation that results in the silencing of the paternally derived X-chromosome. Due to its parent-of-origin-specific pattern of inactivation, imprinted X-inactivation is a model of mitotic as well as meiotic, i.e., transgenerational, epigenetic inheritance. All cells of the early mouse embryo undergo imprinted X-inactivation, a pattern that is subsequently maintained in extraembryonic cell types in vivo and in vitro. Here, we describe both high- and low-throughput approaches to interrogate imprinted X-inactivation in the mouse embryo as well in cultured extraembryonic stem cells.

Indexed as

AllelesX Chromosome InactivationAnimalsEmbryo, MammalianEmbryonic DevelopmentEmbryonic Stem CellsEpigenomicsFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalIn Situ Hybridization, FluorescenceMicePolymorphism, Single NucleotideSequence Analysis, RNAAllele-specific gene expression analysesExtraembryonic endoderm (XEN) stem cellsPreimplantation mouse embryogenesisTrophoblast stem cells (TSCs)X-chromosome inactivation

Identifiers

PMID30218368
PMCPMC6209079
OpenAlexW2890587283

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.