Evidence map›Paper›PMID 30217971›Full record

SynthesisTranslational psychiatry2018

Genome-wide association study of seasonal affective disorder.

Kwo Wei David Ho, Shizhong Han, Jakob V Nielsen, Dubravka Jancic, Benjamin Hing, Jess Fiedorowicz, Myrna M Weissman, Douglas F Levinson, James B Potash

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Translational psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Kwo Wei David HoDepartment of Neurology, University of Florida, Gainesville, FL, USA.
Shizhong HanDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Jakob V NielsenDepartment of Neurobiology Research, Institute of Molecular Medicine, University of Southern Denmark, Odense C, Denmark.
Dubravka JancicDepartment of Psychiatry, University of Iowa, Iowa City, IA, USA.
Benjamin HingDepartment of Psychiatry, University of Iowa, Iowa City, IA, USA.
Jess FiedorowiczDepartment of Psychiatry, University of Iowa, Iowa City, IA, USA.
Myrna M WeissmanDepartment of Psychiatry, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Douglas F LevinsonDepartment of Psychiatry, Stanford University School of Medicine, Palo Alto, CA, USA.
James B PotashDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, MD, USA. jpotash@jhmi.edu.ORCID http://orcid.org/0000-0002-5802-8079
University of Iowa · USJohns Hopkins University · USNew York Psychoanalytic Society and Institute · USStanford University · USUniversity of Florida · USUniversity of Southern Denmark · DK

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
MOLECULAR GENETICS OF SCHIZOPHRENIAR01MH059571 · NIMH · UNIVERSITY OF CHICAGO · PI GEJMAN, PABLO V. · 1999 to 2007
$8.0M
GENETICS OF RECURRENT EARLY-ONSET DEPRESSIONR01MH061686 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI LEVINSON, DOUGLAS FREDERICK · 1999 to 2008
$3.8M
Depression susceptibility genes and networks: expression, eQTL and GWAS analysisRC2MH089916 · NIMH · STANFORD UNIVERSITY · PI LEVINSON, DOUGLAS FREDERICK · 2009 to 2010
$3.4M
GENETICS OF EARLY-ONSET MAJOR DEPRESSIONR01MH060912 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI WEISSMAN, MYRNA M · 1999 to 2008
$3.3M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059534 · NIMH · WASHINGTON UNIVERSITY · PI RICE, JOHN P. · 1998 to 2007
$3.1M
GENETICS OF EARLY ONSET DEPRESSIONR01MH059552 · NIMH · JOHNS HOPKINS UNIVERSITY · PI POTASH, JAMES B. · 1999 to 2008
$2.8M
MOLECULAR GENETICS OF SCHIZOPHRENIAR01MH060879 · NIMH · WASHINGTON UNIVERSITY · PI CLONINGER, C. ROBERT · 1999 to 2006
$2.7M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059545 · NIMH · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI NURNBERGER, JOHN I · 1998 to 2007
$2.6M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059533 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MACKINNON, DEAN FREDERICK · 1998 to 2007
$2.4M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH060068 · NIMH · UNIVERSITY OF CALIFORNIA IRVINE · PI BYERLEY, WILLIAM · 1998 to 2007
$2.1M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059553 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BERRETTINI, WADE H · 1998 to 2007
$2.1M
Intramural NIH HHS Z01 MH002810NIAAA NIH HHS R01 AA022994NIGMS NIH HHS T32 GM007337NIMH NIH HHS K24 MH064197NIMH NIH HHS R01 MH059533NIMH NIH HHS R01 MH059534NIMH NIH HHS R01 MH059535NIMH NIH HHS R01 MH059545NIMH NIH HHS R01 MH059548NIMH NIH HHS R01 MH059552NIMH NIH HHS R01 MH059553NIMH NIH HHS R01 MH059556NIMH NIH HHS R01 MH059565NIMH NIH HHS R01 MH059566NIMH NIH HHS R01 MH059567NIMH NIH HHS R01 MH059571NIMH NIH HHS R01 MH059586NIMH NIH HHS R01 MH059587NIMH NIH HHS R01 MH059588NIMH NIH HHS R01 MH060068NIMH NIH HHS R01 MH060870NIMH NIH HHS R01 MH060879NIMH NIH HHS R01 MH060912NIMH NIH HHS R01 MH061675NIMH NIH HHS R01 MH061686NIMH NIH HHS R01 MH067257NIMH NIH HHS RC2 MH089916
6 · The paper itself

Abstract

Family and twin studies have shown a genetic component to seasonal affective disorder (SAD). A number of candidate gene studies have examined the role of variations within biologically relevant genes in SAD susceptibility, but few genome-wide association studies (GWAS) have been performed to date. The authors aimed to identify genetic risk variants for SAD through GWAS. The authors performed a GWAS for SAD in 1380 cases and 2937 controls of European-American (EA) origin, selected from samples for GWAS of major depressive disorder and of bipolar disorder. Further bioinformatic analyses were conducted to examine additional genomic and biological evidence associated with the top GWAS signals. No susceptibility loci for SAD were identified at a genome-wide significant level. The strongest association was at an intronic variant (rs139459337) within ZBTB20 (odds ratio (OR) = 1.63, p = 8.4 × 10

Indexed as

Genome-Wide Association StudyNerve Tissue ProteinsSeasonal Affective DisorderTranscription FactorsWhite PeopleAllelesBipolar DisorderCase-Control StudiesFemaleGenetic Predisposition to DiseaseHumansLogistic ModelsMajor Depressive DisorderMalePolymorphism, Single NucleotideQuantitative Trait LociNerve Tissue ProteinsTranscription FactorsZBTB20 protein, human

Identifiers

PMID30217971
PMCPMC6138666
OpenAlexW2891986494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.