Evidence map›Paper›PMID 30217143›Full record

ArticleBMC genomics2018

Identification, characterization and expression analysis of transient receptor potential channel genes in the oriental fruit fly, Bactrocera dorsalis.

Hong-Ai Su, Xue Bai, Tian Zeng, Yong-Yue Lu, Yi-Xiang Qi

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

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  9. Chromatin-Remodelling ATPasesInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hong-Ai SuDepartment of Entomology, College of Agriculture, South China Agricultural University, Wushan Road 483, Tianhe District, Guangzhou, 510642, China.
Xue BaiDepartment of Entomology, College of Agriculture, South China Agricultural University, Wushan Road 483, Tianhe District, Guangzhou, 510642, China.
Tian ZengDepartment of Entomology, College of Agriculture, South China Agricultural University, Wushan Road 483, Tianhe District, Guangzhou, 510642, China.
Yong-Yue LuDepartment of Entomology, College of Agriculture, South China Agricultural University, Wushan Road 483, Tianhe District, Guangzhou, 510642, China. luyongyue@scau.edu.cn.
Yi-Xiang QiDepartment of Entomology, College of Agriculture, South China Agricultural University, Wushan Road 483, Tianhe District, Guangzhou, 510642, China. qiyixiang@scau.edu.cn.
South China Agricultural University · CN

Funding

National key research and development project 2016YFC1201200Natural Science Foundation of Guangdong Province (CN) 2018A030310204
6 · The paper itself

Abstract

backgroundMembers of the transient receptor potential (TRP) superfamily are proteins that are critical for insects to detect changes in environmental stimuli and also play key roles in their sensory physiology. Moreover, this family provides potential targets for the design of insecticides. In contrast to a large number of studies conducted on Drosophila melanogaster, molecular studies to characterize TRP channels in agricultural pests are lacking.

resultsIn this study, we identified 15 TRP channel genes in the genome of a notorious agricultural pest, the oriental fruit fly (Bactrocera dorsalis). Comparative analysis of the TRP channels (TRPs) in B. dorsalis with those in D. melanogaster, Glossina morsitans, Musca domestica and the closely related Ceratitis capitata, and TRPs from mosquitoes, Hymenoptera, Lepidoptera, Coleoptera and Hemiptera reveals that members of TRPA and TRPP subfamily are most diverse among insects. The results also suggest that Tephritidae family have two TRP-Polycystin 2 members even though most insects either possess just one or none. The highest expression levels of these two genes are in the testes of B. dorsalis, implying a role in regulating sperm function. We analyzed the expression profiles of the TRP channels identified in this study at different life stages using quantitative real time PCR. The results of this study demonstrate that all TRP channels are mainly expressed in adults, especially at mature stages. The one exception to this trend is BdTRPM, which is more highly expressed in the eggs of B. dorsalis, implying an important role in early development. We also detected the spatial expression of TRP channels in mature adult fruit flies by investigating expression levels within various tissues including those involved in sensory function, such as antennae, compound eyes, mouthparts, legs, and wings, as well as tissues critical for homeostasis and physiology (i.e., Malpighian tubules, the brain and gut as well as fat bodies, ovaries, and testes).

conclusionThe results of this study establish a solid foundation for future functional characterization of B. dorsalis TRP channels as well as those of other insects and will help future insecticide design targeting these channels.

Indexed as

Amino Acid SequenceAnimalsDatabases, GeneticFemaleGene Expression Regulation, DevelopmentalGenes, InsectGenome, InsectInsectaMalePhylogenyProtein IsoformsSpecies SpecificityTephritidaeTissue DistributionTranscriptomeTransient Receptor Potential ChannelsProtein IsoformsTransient Receptor Potential ChannelsTRPP Cation ChannelsBactrocera dorsalisCationic channelsExpression analysisSplice formsTransient receptor potential

Identifiers

PMID30217143
PMCPMC6137742
OpenAlexW2891631779

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.