Evidence map›Paper›PMID 30216140›Full record

ArticleNeural computation2018

Robust Closed-Loop Control of a Cursor in a Person with Tetraplegia using Gaussian Process Regression.

David M Brandman, Michael C Burkhart, Jessica Kelemen, Brian Franco, Matthew T Harrison, Leigh R Hochberg

Registry-linked trialAbstract read
In one paragraph

Article in Neural computation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00912041 (BrainGate2), which is not on this map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00912041 narecruitingnot on this map

BrainGate2: Feasibility Study of an Intracortical Neural Interface System for Persons With Tetraplegia

TypeinterventionalSponsorLeigh R. Hochberg, MD, PhD.Ran2009 to 2038Enrolled27ConditionsTetraplegia, Spinal Cord Injuries, Amyotrophic Lateral Sclerosis, Brain Stem InfarctionsArmsPlacement of the BrainGate2 sensor(s) into the motor-related cortex
3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

David M BrandmanNeuroscience Graduate Program, Department of Neuroscience, Carney Institute for Brain Science, and School of Engineering, Brown University, Providence, RI 02912, U.S.A.; and Department of Surgery (Neurosurgery), Dalhousie University, Halifax, NS B3H 347 Canada david_brandman@brown.edu.
Michael C BurkhartDivision of Applied Mathematics, Brown University, Providence, RI 02912, U.S.A. michael_burkhart@alumnibrown.edu.
Jessica KelemenCenter for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114, U.S.A. jkelemen@mgh.harvard.edu.
Brian FrancoCenter for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114, U.S.A. brfranco34@gmail.com.
Matthew T HarrisonDivision of Applied Mathematics, Brown University, Providence, RI 02912, U.S.A. matthew_harrison@brown.edu.
Leigh R HochbergCenter for Neurorestoration and Neurotechnology, Rehabilitation R&D Service, Department of Veterans Affairs Medical Center, Providence, RI 02908; Carney Institute for Brain Science and School of Engineering, Brown University, Providence, RI 02912; Center for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114; and Neurology, Harvard Medical School, Boston, MA 02115, U.S.A. leigh_hochberg@brown.edu.

Funding

The neural basis of sequential control in human and non-human primatesP20GM103645 · NIGMS · BROWN UNIVERSITY · PI SANES, JEROME N · 2013 to 2022
$22.9M
Restoring Communication with an Intracortical Neural Interface SystemR01DC009899 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI HOCHBERG, LEIGH R · 2009 to 2017
$7.0M
CRNCS: Identification and Plasticity of Neuronal MicrocircuitsR01MH102840 · NIMH · CITY COLLEGE OF NEW YORK · PI AMARASINGHAM, ASOHAN · 2013 to 2015
$1.2M
NIDCD NIH HHS R01 DC009899NIGMS NIH HHS P20 GM103645NIMH NIH HHS R01 MH102840
6 · The paper itself

Abstract

Intracortical brain computer interfaces can enable individuals with paralysis to control external devices through voluntarily modulated brain activity. Decoding quality has been previously shown to degrade with signal nonstationarities-specifically, the changes in the statistics of the data between training and testing data sets. This includes changes to the neural tuning profiles and baseline shifts in firing rates of recorded neurons, as well as nonphysiological noise. While progress has been made toward providing long-term user control via decoder recalibration, relatively little work has been dedicated to making the decoding algorithm more resilient to signal nonstationarities. Here, we describe how principled kernel selection with gaussian process regression can be used within a Bayesian filtering framework to mitigate the effects of commonly encountered nonstationarities. Given a supervised training set of (neural features, intention to move in a direction)-pairs, we use gaussian process regression to predict the intention given the neural data. We apply kernel embedding for each neural feature with the standard radial basis function. The multiple kernels are then summed together across each neural dimension, which allows the kernel to effectively ignore large differences that occur only in a single feature. The summed kernel is used for real-time predictions of the posterior mean and variance under a gaussian process framework. The predictions are then filtered using the discriminative Kalman filter to produce an estimate of the neural intention given the history of neural data. We refer to the multiple kernel approach combined with the discriminative Kalman filter as the MK-DKF. We found that the MK-DKF decoder was more resilient to nonstationarities frequently encountered in-real world settings yet provided similar performance to the currently used Kalman decoder. These results demonstrate a method by which neural decoding can be made more resistant to nonstationarities.

Indexed as

Brain-Computer InterfacesNeural Networks, ComputerQuadriplegiaUser-Computer InterfaceAdultHumansMale

Identifiers

PMID30216140
PMCPMC6685768

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.