Evidence map›Paper›PMID 30216060›Full record

ArticleJournal of the American Chemical Society2018

Cytochrome P450-Catalyzed Hydroxylation Initiating Ether Formation in Platensimycin Biosynthesis.

Jeffrey D Rudolf, Liao-Bin Dong, Xiao Zhang, Hans Renata, Ben Shen

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. A Revised Model for Muscarine Biosynthesis Involving Lysine Trimethylation.Angewandte Chemie (International ed. in English) · 2026
    Article
  2. Article
  3. Total Synthesis FacilitatesJournal of the American Chemical Society · 2024
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Synthetic utility of oxygenases in site-selective terpenoid functionalization.Journal of industrial microbiology & biotechnology · 2021
    Review
  11. Bacterial terpenome.Natural product reports · 2021
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jeffrey D RudolfDepartment of Chemistry , The Scripps Research Institute , Jupiter , Florida 33458 , United States.ORCID 0000-0003-2718-9651
Liao-Bin DongDepartment of Chemistry , The Scripps Research Institute , Jupiter , Florida 33458 , United States.
Xiao ZhangDepartment of Chemistry , The Scripps Research Institute , Jupiter , Florida 33458 , United States.
Hans RenataDepartment of Chemistry , The Scripps Research Institute , Jupiter , Florida 33458 , United States.ORCID 0000-0003-2468-2328
Ben ShenDepartment of Chemistry , The Scripps Research Institute , Jupiter , Florida 33458 , United States.ORCID 0000-0002-9750-5982

Funding

Biocatalytic C-H Functionalization Logic in the Chemoenzymatic Synthesis of Therapeutic Natural ProductsR35GM128895 · NIGMS · UNIVERSITY OF FLORIDA · PI Hans Renata · 2018 to 2026
$3.7M
Discovery and biosynthesis of diterpenoid natural products in actinomycetalsR01GM114353 · NIGMS · SCRIPPS FLORIDA · PI SHEN, BEN · 2016 to 2019
$1.8M
Cytochrome P450 Enzymes from Streptomyces: Diverse Biocatalysts in Natural Products BiosynthesisR00GM124461 · NIGMS · UNIVERSITY OF FLORIDA · PI RUDOLF, JEFFREY DANIEL · 2019 to 2021
$747k
Cytochrome P450 Enzymes from Streptomyces: Diverse Biocatalysts in Natural Products BiosynthesisK99GM124461 · NIGMS · SCRIPPS FLORIDA · PI RUDOLF, JEFFREY DANIEL · 2017 to 2017
$90k
NIGMS NIH HHS K99 GM124461NIGMS NIH HHS R00 GM124461NIGMS NIH HHS R01 GM114353NIGMS NIH HHS R35 GM128895
6 · The paper itself

Abstract

Platensimycin (PTM) and platencin (PTN) are potent and selective inhibitors of bacterial and mammalian fatty acid synthases. The regio- and stereospecificity of the ether oxygen atom in PTM, which PTN does not have, strongly contribute to the selectivity and potency of PTM. We previously reported the biosynthetic origin of the 11 S,16 S-ether moiety by characterizing the diterpene synthase PtmT3 as a (16 R)- ent-kauran-16-ol synthase and isolating 11-deoxy-16 R-hydroxylated congeners of PTM from the Δ ptmO5 mutant. PtmO5, a cytochrome P450, was proposed to catalyze formation of the ether moiety in PTM. Here we report the in vitro characterization of PtmO5, revealing that PtmO5 stereoselectively hydroxylates the C-11 position of the ent-kaurane scaffold resulting in an 11 S,16 R-diol intermediate. The ether moiety, the oxygen of which originates from the P450-catalyzed hydroxylation at C-11, is formed via cyclization of the diol intermediate. This study provides mechanistic insight into ether formation in natural product biosynthetic pathways.

Indexed as

AdamantaneAminobenzoatesAnilidesCatalysisCyclizationCytochrome P-450 Enzyme SystemEscherichia coliEthersHydroxylationMultigene FamilySpirulinaStereoisomerismAdamantaneAminobenzoatesAnilidesCytochrome P-450 Enzyme SystemEthersplatensimycin

Identifiers

PMID30216060
PMCPMC6211292

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.