Evidence map›Paper›PMID 30216047›Full record

ArticleAnalytical chemistry2018

Dissection of Fragmentation Pathways in Protonated N-Acetylhexosamines.

Abhigya Mookherjee, Sanjit S Uppal, Miklos Guttman

Abstract read
In one paragraph

Article in Analytical chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Antioxidant and Teratogenic Activities of Formulated Agar Extracted from Brown SeaweedEvidence-based complementary and alternative medicine : eCAM · 2022
    Article
  4. Linkage Memory in Underivatized Protonated Carbohydrates.Journal of the American Society for Mass Spectrometry · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Abhigya MookherjeeDepartment of Medicinal Chemistry , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0003-0897-8153
Sanjit S UppalDepartment of Medicinal Chemistry , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0002-4288-7864
Miklos GuttmanDepartment of Medicinal Chemistry , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0003-2419-1334

Funding

Hybrid structural mass spectrometry for rapid site-specific glycan structural elucidationR01GM127579 · NIGMS · UNIVERSITY OF WASHINGTON · PI GUTTMAN, MIKLOS · 2018 to 2021
$1.7M
NIGMS NIH HHS R01 GM127579
6 · The paper itself

Abstract

Structural characterization of carbohydrates by mass spectrometry necessitates a detailed understanding of their gas phase behavior, particularly for protonated carbohydrates that can undergo complex structural rearrangements during fragmentation. Here we utilize tandem mass spectrometry, isotopic labeling, gas-phase hydrogen/deuterium exchange, and ion mobility measurements to characterize structures of the various product ions of protonated N-acetylhexosamines. Following the facile loss of the reducing end hydroxyl group, we identify two primary fragmentation pathways. Detailed mapping of each step in the fragmentation pathway provides new insight into the mechanisms that drive collision-induced dissociation of protonated carbohydrates. Several of the smaller fragment ions are mixtures of structural isomers, and the relative distributions of these structures reveals information about the stereochemistry of the precursor molecule.

Indexed as

ProtonsDeuterium Exchange MeasurementHexosaminesMolecular ConformationTandem Mass SpectrometryHexosaminesProtons

Identifiers

PMID30216047
PMCPMC6490963

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.