Evidence map›Paper›PMID 30215709›Full record

SynthesisHuman molecular genetics2018

Functionally distinct ERAP1 and ERAP2 are a hallmark of HLA-A29-(Birdshot) Uveitis.

Jonas J W Kuiper, Jessica van Setten, Matthew Devall, Mircea Cretu-Stancu, Sanne Hiddingh, Roel A Ophoff, Tom O A R Missotten, Mirjam van Velthoven, Anneke I Den Hollander, Carel B Hoyng and 11 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 2 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 2 syntheses or guidelines pooled it, 54 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Exploring the Involvement ofLife (Basel, Switzerland) · 2026
    Review
  5. Review
  6. Article
  7. Review
  8. Single-cell profiling identifies a CD8Nature communications · 2024
    Article
  9. Review
  10. Biology of HLA class I associated inflammatory diseases.Best practice & research. Clinical rheumatology · 2024
    Review
  11. Review
  12. Article
  13. Association ofFrontiers in immunology · 2024
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Some practical issues about HLA-A29 in birdshot retinochoroiditis.Journal of ophthalmic inflammation and infection · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 4 countries.

Jonas J W KuiperDepartment of Ophthalmology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Jessica van SettenDepartment of Cardiology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Matthew DevallLaboratory of Translational Immunology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Mircea Cretu-StancuDepartment of Genetics, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Sanne HiddinghDepartment of Ophthalmology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Roel A OphoffDepartment of Psychiatry, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, Netherlands.
Tom O A R MissottenRotterdam Eye Hospital, Rotterdam, Netherlands.
Mirjam van VelthovenRotterdam Eye Hospital, Rotterdam, Netherlands.
Anneke I Den HollanderDepartment of Ophthalmology, Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Centre, Nijmegen, Netherlands.
Carel B HoyngDepartment of Ophthalmology, Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Centre, Nijmegen, Netherlands.
Edward JamesCentre for Cancer Immunology, Faculty of Medicine, University Hospital Southampton, Southampton, UK.
Emma ReevesCentre for Cancer Immunology, Faculty of Medicine, University Hospital Southampton, Southampton, UK.
Miguel Cordero-ComaOphthalmology Department, Hospital de León, IBIOMED, Universidad de León, León, Spain.
Alejandro FonollosaOphthalmology Department, BioCruces Health Research Institute, Hospital Universitario Cruces, Barakaldo, Spain.
Alfredo AdánOphthalmology Department, Hospital Clinic, Barcelona, Spain.
Javier MartínInstituto de Parasitología y Biomedicina 'López-Neyra', CSIC, PTS Granada, Granada Spain.
Bobby P C KoelemanDepartment of Genetics, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Joke H de BoerDepartment of Ophthalmology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Sara L PulitDepartment of Genetics, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Ana MárquezSystemic Autoimmune Disease Unit, Hospital Universitario San Cecilio, Instituto de Investigación Biosanitaria de Granada, Granada Spain.
Timothy R D J RadstakeLaboratory of Translational Immunology, University Medical Center Utrecht, University of Utrecht, Utrecht, Netherlands.
Utrecht University · NLRadboud University Nijmegen · NLRotterdam Eye Hospital · NLUniversity Hospital Southampton NHS Foundation Trust · GBBioCruces Health research Institute · ESHospital Clínic de Barcelona · ESHospital de León · ESInstituto de Investigación Biosanitaria de Granada · ESInstituto de Parasitología y Biomedicina "López - Neyra" · ESUniversity of California, Los Angeles · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Birdshot Uveitis (Birdshot) is a rare eye condition that affects HLA-A29-positive individuals and could be considered a prototypic member of the recently proposed 'MHC-I (major histocompatibility complex class I)-opathy' family. Genetic studies have pinpointed the endoplasmic reticulum aminopeptidase (ERAP1) and (ERAP2) genes as shared associations across MHC-I-opathies, which suggests ERAP dysfunction may be a root cause for MHC-I-opathies. We mapped the ERAP1 and ERAP2 haplotypes in 84 Dutch cases and 890 controls. We identified association at variant rs10044354, which mediated a marked increase in ERAP2 expression. We also identified and cloned an independently associated ERAP1 haplotype (tagged by rs2287987) present in more than half of the cases; this ERAP1 haplotype is also the primary risk and protective haplotype for other MHC-I-opathies. We show that the risk ERAP1 haplotype conferred significantly altered expression of ERAP1 isoforms in transcriptomic data (n = 360), resulting in lowered protein expression and distinct enzymatic activity. Both the association for rs10044354 (meta-analysis: odds ratio (OR) [95% CI]=2.07[1.58-2.71], P = 1.24 × 10(-7)) and rs2287987 (OR[95% CI]: =2.01[1.51-2.67], P = 1.41 × 10(-6)) replicated and showed consistent direction of effect in an independent Spanish cohort of 46 cases and 2103 controls. In both cohorts, the combined rs2287987-rs10044354 haplotype associated with Birdshot more strongly than either variant alone [meta-analysis: P=3.9 × 10(-9)]. Finally, we observed that ERAP2 protein expression is dependent on the ERAP1 background across three European populations (n = 3353). In conclusion, a functionally distinct combination of ERAP1 and ERAP2 are a hallmark of Birdshot and provide rationale for strategies designed to correct ERAP function for treatment of Birdshot and MHC-I-opathies more broadly.

Indexed as

Genetic Predisposition to DiseaseAminopeptidasesFemaleGenetic Association StudiesGenotypeHaplotypesHLA-A AntigensHumansMaleMinor Histocompatibility AntigensMinor Histocompatibility LociPolymorphism, Single NucleotideUveitisAminopeptidasesERAP1 protein, humanERAP2 protein, humanHLA-A29 antigenHLA-A AntigensMinor Histocompatibility Antigens

Identifiers

PMID30215709
PMCPMC6276832
OpenAlexW2951724807

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.