Evidence map›Paper›PMID 30215205›Full record

ArticleCellular oncology (Dordrecht, Netherlands)2018

Epigenetic markers in basal cell carcinoma: universal themes in oncogenesis and tumor stratification? - a short report.

Rajesh C Rao, May P Chan, Chris A Andrews, Alon Kahana

Abstract read
In one paragraph

Article in Cellular oncology (Dordrecht, Netherlands), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Long non-coding RNAs in cutaneous biology and keratinocyte carcinomas.Cellular and molecular life sciences : CMLS · 2020
    Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rajesh C RaoDepartment of Ophthalmology and Visual Sciences, W.K. Kellogg Eye Center, University of Michigan, Brehm 8333, 1000 Wall Street, Ann Arbor, MI, 48105, USA. rajeshr@umich.edu.ORCID http://orcid.org/0000-0002-5776-8366
May P ChanDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Chris A AndrewsDepartment of Ophthalmology and Visual Sciences, W.K. Kellogg Eye Center, University of Michigan, Brehm 8333, 1000 Wall Street, Ann Arbor, MI, 48105, USA.
Alon KahanaDepartment of Ophthalmology and Visual Sciences, W.K. Kellogg Eye Center, University of Michigan, Brehm 8333, 1000 Wall Street, Ann Arbor, MI, 48105, USA. akahana@med.umich.edu.
University of Michigan · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Epigenetic Control of Retinal DevelopmentK08EY026654 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAO, RAJESH C. · 2017 to 2019
$666k
A. Alfred Taubman Medical Research Institute Wexner ScholarGenentech (US) VISORB clinical trialNCI NIH HHS P30 CA046592NCI NIH HHS P30CA046592NEI NIH HHS K08 EY026654NEI NIH HHS K08EY026654Research to Prevent Blindness Career Development AwardResearch to Prevent Blindness Unrestricted Departmental GrantResearch to Prevent Blindness (US) Clinician-Scientist Award
6 · The paper itself

Abstract

backgroundAdvanced basal cell carcinomas (BCCs) suffer from a scarcity of effective treatment options. Previously, we found that the targetable histone methyltransferase EZH2 was upregulated in aggressive BCC subtypes, suggesting that epigenetics may play a role in BCC progression. The purpose of this study was to determine whether EZH2-associated proteins and marks may be employed for the stratification of BCC histologic subtypes.

methodsSixty-two specimens (from 61 patients), representing more or less aggressive BCC histologic subtypes and matching non-malignant epidermal cells, were included in this study. Immunohistochemistry of H3K27me3, 5hmC, NSD2, MOF and JARID1B was performed to assess their putative associations with BCC histologic subtypes, as well as with EZH2 and Ki67 expression levels.

resultsWe found that H3K27me3 and 5hmC upregulation was positively correlated with the occurrence of a less aggressive BCC histology. The modifications were also positively correlated with each other. Interestingly, we found that they were negatively correlated with the expression of EZH2, a marker for an aggressive BCC histology. The levels of NSD2, MOF, H3K27me3 and 5hmC were found to be universally upregulated in BCCs versus non-malignant epidermal cells.

conclusionsOur data reveal an EZH2-associated epigenetic marker profile that correlates with histologic signs of BCC aggressiveness. Our findings may have diagnostic and therapeutic implications, and indicate that epigenetic markers may be shared even with relatively less aggressive tumor types, thereby suggesting universal themes.

Indexed as

Epigenesis, Genetic5-MethylcytosineBasal Cell CarcinomaCarcinogenesisHistonesHumansLysineMethylationSkin Neoplasms5-hydroxymethylcytosine5-MethylcytosineHistonesLysineBasal cell carcinomaBiomarkersEpigeneticsHistone acetyltransferaseHistone methyltransferaseSkin cancer

Identifiers

PMID30215205
PMCPMC6536376
OpenAlexW2890182231

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.