Evidence map›Paper›PMID 30214852›Full record

ArticleChemistryOpen2018

Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.

Naomi Ohbayashi, Kazutaka Murayama, Miyuki Kato-Murayama, Mutsuko Kukimoto-Niino, Tamami Uejima, Takayoshi Matsuda, Noboru Ohsawa, Shigeyuki Yokoyoma, Hiroshi Nojima, Mikako Shirouzu

Open access · goldAbstract read
In one paragraph

Article in ChemistryOpen, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Naomi OhbayashiDivision of Structural and Synthetic Biology RIKEN Center for Life Science Technologies 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Kazutaka MurayamaRIKEN Center for Biosystems Dynamics Research 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Miyuki Kato-MurayamaRIKEN Center for Biosystems Dynamics Research 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Mutsuko Kukimoto-NiinoRIKEN Center for Biosystems Dynamics Research 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Tamami UejimaRIKEN Center for Biosystems Dynamics Research 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Takayoshi MatsudaDivision of Structural and Synthetic Biology RIKEN Center for Life Science Technologies 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Noboru OhsawaDivision of Structural and Synthetic Biology RIKEN Center for Life Science Technologies 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Shigeyuki YokoyomaRIKEN Structural Biology Laboratory 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.
Hiroshi NojimaDepartment of Molecular Genetics Osaka University 3-1 Yamadaoka, Suita Osaka 565-0871 Japan.
Mikako ShirouzuRIKEN Center for Biosystems Dynamics Research 1-7-22 Suehiro-cho, Tsurumi Yokohama 230-0045 Japan.ORCID 0000-0002-7997-2149
RIKEN Center for Biosystems Dynamics Research · JPCE Technologies (United Kingdom) · GBMuseum of Japanese Art Yamato Bunkakan · JPRIKEN BioResource Research Center · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gefitinib is the molecular target drug for advanced non-small-cell lung cancer. The primary target of gefitinib is the positive mutation of epidermal growth factor receptor, but it also inhibits cyclin G-associated kinase (GAK). To reveal the molecular bases of GAK and gefitinib binding, structure analyses were conducted and determined two forms of the gefitinib-bound nanobody⋅GAK kinase domain complex structures. The first form, GAK_1, has one gefitinib at the ATP binding pocket, whereas the second form, GAK_2, binds one each in the ATP binding site and a novel binding site adjacent to the activation segment C-terminal helix, a unique element of the Numb-associated kinase family. In the novel binding site, gefitinib binds in the hydrophobic groove around the activation segment, disrupting the conserved hydrogen bonds for the catalytic activity. These structures suggest possibilities for the development of selective GAK inhibitors for viral infections, such as the hepatitis C virus.

Indexed as

complex structuresgefitinibinhibitor developmentnovel binding sitesprotein kinases

Identifiers

PMID30214852
PMCPMC6129943
OpenAlexW2891893250

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.