Evidence map›Paper›PMID 30214656›Full record

ArticleThe journal of physical chemistry. C, Nanomaterials and interfaces2017

Oligomerization Alters Binding Affinity Between Amyloid Beta and a Modulator of Peptide Aggregation.

Silvia Hilt, Tatu Rojalin, Tapani Viitala, Artturi Koivuniemi, Alex Bunker, Sebastian Wachsmann Hogiu, Tamás Kálai, Kálmán Hideg, Marjo Yliperttula, John C Voss

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. C, Nanomaterials and interfaces, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 5 countries.

Silvia HiltDepartment of Biochemistry & Molecular Medicine, University of California, Davis, CA 95616, USA.
Tatu RojalinDepartment of Pathology and Laboratory Medicine, and Center for Biophotonics, University of California Davis, USA.
Tapani ViitalaCentre for Drug Research, Division of Pharmaceutical Biosciences, University of Helsinki, Finland.
Artturi KoivuniemiCentre for Drug Research, Division of Pharmaceutical Biosciences, University of Helsinki, Finland.
Alex BunkerCentre for Drug Research, Division of Pharmaceutical Biosciences, University of Helsinki, Finland.
Sebastian Wachsmann HogiuDepartment of Pathology and Laboratory Medicine, and Center for Biophotonics, University of California Davis, USA.
Tamás KálaiInstitute of Organic and Medicinal Chemistry, University of Pécs, H 7624 Pécs, Szigeti st. 12. Pécs, Hungary.
Kálmán HidegInstitute of Organic and Medicinal Chemistry, University of Pécs, H 7624 Pécs, Szigeti st. 12. Pécs, Hungary.
Marjo YliperttulaCentre for Drug Research, Division of Pharmaceutical Biosciences, University of Helsinki, Finland.
John C VossDepartment of Biochemistry & Molecular Medicine, University of California, Davis, CA 95616, USA.
University of Helsinki · FIUniversity of California, Davis · USUniversity of Pecs · HUMcGill University · CA

Funding

UC Davis Alzheimer's Disease Core CenterP30AG010129 · NIA · UNIVERSITY OF CALIFORNIA DAVIS · PI DECARLI, CHARLES · 1991 to 2020
$28.3M
The structural basis of apoE4's role in Alzheimer's DiseaseR01AG029246 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI VOSS, JOHN CARL · 2007 to 2011
$1.3M
Neuroscience of Cognitive AgingT32AG050061 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DECARLI, CHARLES · 2016 to 2020
$869k
NIA NIH HHS P30 AG010129NIA NIH HHS R01 AG029246NIA NIH HHS T32 AG050061
6 · The paper itself

Abstract

The soluble oligomeric form of the amyloid beta (Aβ) peptide is the major causative agent in the molecular pathogenesis of Alzheimer's disease (AD). We have previously developed a pyrroline-nitroxyl fluorene compound (SLF) that blocks the toxicity of Aβ. Here we introduce the multi-parametric surface plasmon resonance (MP-SPR) approach to quantify SLF binding and effect on the self-association of the peptide via a label-free, real-time approach. Kinetic analysis of SLF binding to Aβ and measurements of layer thickness alterations inform on the mechanism underlying the ability of SLF to inhibit Aβ toxicity and its progression towards larger oligomeric assemblies. Depending on the oligomeric state of Aβ, distinct binding affinities for SLF are revealed. The Aβ monomer and dimer uniquely possess sub-nanomolar affinity for SLF via a non-specific mode of binding. SLF binding is weaker in oligomeric Aβ, which displays an affinity for SLF on the order of 100 μM. To complement these experiments we carried out molecular docking and molecular dynamics simulations to explore how SLF interacts with the Aβ peptide. The MP-SPR results together with

Identifiers

PMID30214656
PMCPMC6130836
OpenAlexW2762679461

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.