Evidence map›Paper›PMID 30213985›Full record

ArticleScientific reports2018

Method for immobilization of living and synthetic cells for high-resolution imaging and single-particle tracking.

Łukasz Syga, Dian Spakman, Christiaan M Punter, Bert Poolman

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. Physical Changes of Biomacromolecules upon Covalent Surface Immobilization.Langmuir : the ACS journal of surfaces and colloids · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Łukasz SygaDepartment of Biochemistry University of Groningen Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
Dian SpakmanDepartment of Biochemistry University of Groningen Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
Christiaan M PunterDepartment of Biochemistry University of Groningen Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
Bert PoolmanDepartment of Biochemistry University of Groningen Nijenborgh 4, 9747 AG, Groningen, The Netherlands. b.poolman@rug.nl.ORCID 0000-0002-1455-531X
University of Groningen · NL

Funding

EC | European Research Council (ERC) ABCVolume #670578
6 · The paper itself

Abstract

Super-resolution imaging and single-particle tracking require cells to be immobile as any movement reduces the resolution of the measurements. Here, we present a method based on APTES-glutaraldehyde coating of glass surfaces to immobilize cells without compromising their growth. Our method of immobilization is compatible with Saccharomyces cerevisiae, Escherichia coli, and synthetic cells (here, giant-unilamellar vesicles). The method introduces minimal background fluorescence and is suitable for imaging of single particles at high resolution. With S. cerevisiae we benchmarked the method against the commonly used concanavalin A approach. We show by total internal reflection fluorescence microscopy that modifying surfaces with ConA introduces artifacts close to the glass surface, which are not present when immobilizing with the APTES-glutaraldehyde method. We demonstrate validity of the method by measuring the diffusion of membrane proteins in yeast with single-particle tracking and of lipids in giant-unilamellar vesicles with fluorescence recovery after photobleaching. Importantly, the physical properties and shape of the fragile GUVs are not affected upon binding to APTES-glutaraldehyde coated glass. The APTES-glutaraldehyde is a generic method of immobilization that should work with any cell or synthetic system that has primary amines on the surface.

Indexed as

Artificial CellsConcanavalin AEscherichia coliGlutaralMicroscopy, FluorescenceOptical ImagingSaccharomyces cerevisiaeSurface PropertiesUnilamellar LiposomesConcanavalin AGlutaralUnilamellar Liposomes

Identifiers

PMID30213985
PMCPMC6137044
OpenAlexW2890751425

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.