Evidence map›Paper›PMID 30212908›Full record

ArticleNucleic acids research2018

Snapshots of archaeal DNA replication and repair in living cells using super-resolution imaging.

Floriane Delpech, Yoann Collien, Pierre Mahou, Emmanuel Beaurepaire, Hannu Myllykallio, Roxane Lestini

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Journal of bacteriology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Progress and Challenges in Archaeal Cell Biology.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  10. Article
  11. Computerized fluorescence microscopy of microbial cells.World journal of microbiology & biotechnology · 2021
    Review
  12. Single-Stranded DNA-Binding Proteins in the Archaea.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  13. Open biology · 2020
    Review
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Floriane DelpechLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Yoann CollienLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Pierre MahouLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Emmanuel BeaurepaireLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Hannu MyllykallioLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Roxane LestiniLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS UMR7645 - INSERM U1182, 91128 Palaiseau Cedex, France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using the haloarchaeon Haloferax volcanii as a model, we developed nascent DNA labeling and the functional GFP-labeled single-stranded binding protein RPA2 as novel tools to gain new insight into DNA replication and repair in live haloarchaeal cells. Our quantitative fluorescence microscopy data revealed that RPA2 forms distinct replication structures that dynamically responded to replication stress and DNA damaging agents. The number of the RPA2 foci per cell followed a probabilistic Poisson distribution, implying hitherto unnoticed stochastic cell-to-cell variation in haloarchaeal DNA replication and repair processes. The size range of haloarchaeal replication structures is very similar to those observed earlier in eukaryotic cells. The improved lateral resolution of 3D-SIM fluorescence microscopy allowed proposing that inhibition of DNA synthesis results in localized replication foci clustering and facilitated observation of RPA2 complexes brought about by chemical agents creating DNA double-strand breaks. Altogether our in vivo observations are compatible with earlier in vitro studies on archaeal single-stranded DNA binding proteins. Our work thus underlines the great potential of live cell imaging for unraveling the dynamic nature of transient molecular interactions that underpin fundamental molecular processes in the Third domain of life.

Indexed as

DNA RepairAlgorithmsArchaeal ProteinsDNA, ArchaealDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA ReplicationFluorescence Recovery After PhotobleachingGreen Fluorescent ProteinsHaloferax volcaniiMicroscopy, FluorescenceReplication Protein AArchaeal ProteinsDNA, ArchaealDNA-Binding ProteinsGreen Fluorescent ProteinsReplication Protein A

Identifiers

PMID30212908
PMCPMC6237752
OpenAlexW2892100488

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.