Evidence map›Paper›PMID 30212566›Full record

ArticlePLoS pathogens2018

Enzymatic chokepoints and synergistic drug targets in the sterol biosynthesis pathway of Naegleria fowleri.

Wenxu Zhou, Anjan Debnath, Gareth Jennings, Hye Jee Hahn, Boden H Vanderloop, Minu Chaudhuri, W David Nes, Larissa M Podust

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

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  9. Frontiers in public health · 2023
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  11. A Fluorometric Assay for theMicrobiology spectrum · 2022
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  16. Review
  17. Domain-Swap Dimerization ofMolecular pharmacology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Wenxu ZhouDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas, United States of America.
Anjan DebnathCenter for Discovery and Innovation in Parasitic Diseases, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America.ORCID 0000-0001-9294-3927
Gareth JenningsCenter for Discovery and Innovation in Parasitic Diseases, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America.
Hye Jee HahnCenter for Discovery and Innovation in Parasitic Diseases, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America.
Boden H VanderloopDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas, United States of America.
Minu ChaudhuriDepartment of Microbiology and Immunology, Meharry Medical College, Nashville, Tennessee, United States of America.ORCID 0000-0001-7626-1280
W David NesDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas, United States of America.
Larissa M PodustCenter for Discovery and Innovation in Parasitic Diseases, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America.ORCID 0000-0002-8537-8760
University of California San Diego · USTexas Tech University · USMeharry Medical College · US

Funding

UC San Diego Clinical and Translational Research InstituteKL2TR001444 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DEPP, COLIN A. · 2015 to 2024
$15.4M
Discovery of New Anti-amoeba TherapeuticsR33AI119782 · NIAID · TEXAS TECH UNIVERSITY · PI NES, WILLIAM DAVID · 2017 to 2019
$881k
Discovery of New Anti-amoeba TherapeuticsR21AI119782 · NIAID · TEXAS TECH UNIVERSITY · PI NES, WILLIAM DAVID · 2015 to 2016
$447k
NCATS NIH HHS KL2 TR001444NIAID NIH HHS R21 AI119782NIAID NIH HHS R33 AI119782
6 · The paper itself

Abstract

Naegleria fowleri is a free-living amoeba that can also act as an opportunistic pathogen causing severe brain infection, primary amebic meningoencephalitis (PAM), in humans. The high mortality rate of PAM (exceeding 97%) is attributed to (i) delayed diagnosis, (ii) lack of safe and effective anti-N. fowleri drugs, and (iii) difficulty of delivering drugs to the brain. Our work addresses identification of new molecular targets that may link anti-Naegleria drug discovery to the existing pharmacopeia of brain-penetrant drugs. Using inhibitors with known mechanism of action as molecular probes, we mapped the sterol biosynthesis pathway of N. fowleri by GC-MS analysis of metabolites. Based on this analysis, we chemically validated two enzymes downstream to CYP51, sterol C24-methyltransferase (SMT, ERG6) and sterol Δ8-Δ7 -isomerase (ERG2), as potential therapeutic drug targets in N. fowleri. The sterol biosynthetic cascade in N. fowleri displayed a mixture of canonical features peculiar to different domains of life: lower eukaryotes, plants and vertebrates. In addition to the cycloartenol→ergosterol biosynthetic route, a route leading to de novo cholesterol biosynthesis emerged. Isotopic labeling of the de novo-synthesized sterols by feeding N. gruberi trophozoites on the U13C-glucose-containing growth medium identified an exogenous origin of cholesterol, while 7-dehydrocholesterol (7DHC) had enriched 13C-content, suggesting a dual origin of this metabolite both from de novo biosynthesis and metabolism of scavenged cholesterol. Sterol homeostasis in Naegleria may be orchestrated over the course of its life-cycle by a "switch" between ergosterol and cholesterol biosynthesis. By demonstrating the growth inhibition and synergistic effects of the sterol biosynthesis inhibitors, we validated new, potentially druggable, molecular targets in N. fowleri. The similarity of the Naegleria sterol Δ8-Δ7 -isomerase to the human non-opioid σ1 receptor, implicated in human CNS conditions such as addiction, amnesia, pain and depression, provides an incentive to assess structurally diverse small-molecule brain-penetrant drugs targeting the human receptor for anti-Naegleria activity.

Indexed as

Amino Acid SequenceAntiprotozoal AgentsBiosynthetic PathwaysBlood-Brain BarrierCentral Nervous System Protozoal InfectionsCholesterolDrug DiscoveryDrug RepositioningDrug SynergismEnzyme InhibitorsGas Chromatography-Mass SpectrometryHumansMethyltransferasesNaegleria fowleriProtozoan ProteinsSequence Homology, Amino AcidAntiprotozoal AgentsCholesteroldelta 24-sterol methyltransferaseEnzyme InhibitorsMethyltransferasesProtozoan ProteinsSteroid IsomerasesSterols

Identifiers

PMID30212566
PMCPMC6136796
OpenAlexW2890672121

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.