Evidence map›Paper›PMID 30210803›Full record

ArticleNPJ biofilms and microbiomes2018

GePMI: A statistical model for personal intestinal microbiome identification.

Zicheng Wang, Huazhe Lou, Ying Wang, Ron Shamir, Rui Jiang, Ting Chen

Erratum issuedAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Zicheng Wang1MOE Key Laboratory of Bioinformatics and Bioinformatics Division, BNLIST and Department of Automation, Tsinghua University, 100084 Beijing, China.
Huazhe Lou2Bioinformatics Division, BNLIST and Department of Computer Science and Technology, Tsinghua University, 100084 Beijing, China.
Ying Wang3Department of Automation, Xiamen University, 361005 Fujian, China.
Ron Shamir4Blavatnik School of Computer Science, Tel-Aviv University, Tel Aviv, Israel.
Rui Jiang1MOE Key Laboratory of Bioinformatics and Bioinformatics Division, BNLIST and Department of Automation, Tsinghua University, 100084 Beijing, China.
Ting Chen2Bioinformatics Division, BNLIST and Department of Computer Science and Technology, Tsinghua University, 100084 Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human gut microbiomes consist of a large number of microbial genomes, which vary by diet and health conditions and from individual to individual. In the present work, we asked whether such variation or similarity could be measured and, if so, whether the results could be used for personal microbiome identification (PMI). To address this question, we herein propose a method to estimate the significance of similarity among human gut metagenomic samples based on reference-free, long

Identifiers

PMID30210803
PMCPMC6123480

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.