Evidence map›Paper›PMID 30209341›Full record

ArticleScientific reports2018

The acetylation of cyclin-dependent kinase 5 at lysine 33 regulates kinase activity and neurite length in hippocampal neurons.

Juhyung Lee, Yeon Uk Ko, Yuhyun Chung, Nuri Yun, Myungjin Kim, Kyungjin Kim, Young J Oh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Multitargeting the Action of 5-HTInternational journal of molecular sciences · 2022
    Review
  10. Article
  11. Article
  12. Review
  13. The role of Cdk5 in neurological disorders.Frontiers in cellular neuroscience · 2022
    Review
  14. TFP5-Mediated CDK5 Activity Inhibition Improves Diabetic NephropathyFrontiers in cell and developmental biology · 2022
    Article
  15. CREB1ACS omega · 2021
    Article
  16. Three decades of Cdk5.Journal of biomedical science · 2021
    Review
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Juhyung LeeDepartment of Systems Biology, Yonsei University College of Life Science and Biotechnology, Seoul, 03722, Republic of Korea.
Yeon Uk KoDepartment of Systems Biology, Yonsei University College of Life Science and Biotechnology, Seoul, 03722, Republic of Korea.
Yuhyun ChungDepartment of Systems Biology, Yonsei University College of Life Science and Biotechnology, Seoul, 03722, Republic of Korea.
Nuri YunDepartment of Systems Biology, Yonsei University College of Life Science and Biotechnology, Seoul, 03722, Republic of Korea.
Myungjin KimLaboratory of Neurobiochemistry, Department of Neural Development and Disease, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.
Kyungjin KimLaboratory of Neurobiochemistry, Department of Neural Development and Disease, Korea Brain Research Institute, Daegu, 41068, Republic of Korea. kyungjin@dgist.ac.kr.
Young J OhDepartment of Systems Biology, Yonsei University College of Life Science and Biotechnology, Seoul, 03722, Republic of Korea. yjoh@yonsei.ac.kr.
Yonsei University · KRKorea Brain Research Institute · KR

Funding

National Research Foundation of Korea (NRF) 2017M3C7A1025369National Research Foundation of Korea (NRF) 2017R1A2B4007301
6 · The paper itself

Abstract

Cyclin-dependent kinase 5 (CDK5) plays a pivotal role in neural development and neurodegeneration. CDK5 activity can be regulated by posttranslational modifications, including phosphorylation and S-nitrosylation. In this study, we demonstrate a novel mechanism by which the acetylation of CDK5 at K33 (Ac-CDK5) results in the loss of ATP binding and impaired kinase activity. We identify GCN5 and SIRT1 as critical factor controlling Ac-CDK5 levels. Ac-CDK5 achieved its lowest levels in rat fetal brains but was dramatically increased during postnatal periods. Intriguingly, nuclear Ac-CDK5 levels negatively correlated with neurite length in embryonic hippocampal neurons. Either treatment with the SIRT1 activator SRT1720 or overexpression of SIRT1 leads to increases in neurite length, whereas SIRT1 inhibitor EX527 or ectopic expression of acetyl-mimetic (K33Q) CDK5 induced the opposite effect. Furthermore, the expression of nuclear-targeted CDK5 K33Q abolished the SRT1720-induced neurite outgrowth, showing that SIRT1 positively regulates neurite outgrowth via deacetylation of nuclear CDK5. The CDK5 activity-dependent increase of neurite length was mediated by enhanced transcriptional regulation of BDNF via unknown mechanism(s). Our findings identify a novel mechanism by which acetylation-mediated regulation of nuclear CDK5 activity plays a critical role in determining neurite length in embryonic neurons.

Indexed as

AcetylationBrain-Derived Neurotrophic FactorCell LineCyclin-Dependent Kinase 5Gene Expression RegulationHEK293 CellsHeterocyclic Compounds, 4 or More RingsHippocampusHumansLysineNerve Tissue ProteinsNeuritesNeurogenesisNeuronsProtein Processing, Post-TranslationalSirtuin 1Brain-Derived Neurotrophic FactorCDK5 protein, humanCyclin-Dependent Kinase 5Heterocyclic Compounds, 4 or More RingsLysineNerve Tissue ProteinsSirtuin 1SRT1720

Identifiers

PMID30209341
PMCPMC6135752
OpenAlexW2890122581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.