Evidence map›Paper›PMID 30209326›Full record

ArticleScientific reports2018

Gene expression analysis of Atlantic salmon gills reveals mucin 5 and interleukin 4/13 as key molecules during amoebic gill disease.

Mar Marcos-López, Josep A Calduch-Giner, Luca Mirimin, Eugene MacCarthy, Hamish D Rodger, Ian O'Connor, Ariadna Sitjà-Bobadilla, Jaume Pérez-Sánchez, M Carla Piazzon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 62 citations in OpenAlex.

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  7. The Immune Response to the Myxozoan ParasiteInternational journal of molecular sciences · 2023
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  11. Mucosal immune and stress responses ofFrontiers in immunology · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Host-Parasite Interaction of Atlantic salmon (Frontiers in immunology · 2021
    Article
  19. Gill Mucus and Gill MucinMicroorganisms · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Mar Marcos-LópezMarine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Dublin Road, Galway, Co., Galway, H91 T8NW, Ireland. mar.marcos.lopez@gmail.com.
Josep A Calduch-GinerNutrigenomics and Fish Growth Endocrinology Group, Instituto de Acuicultura Torre de la Sal (IATS-CSIC), Castellón, 12595, Spain.
Luca MiriminMarine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Dublin Road, Galway, Co., Galway, H91 T8NW, Ireland.
Eugene MacCarthyMarine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Dublin Road, Galway, Co., Galway, H91 T8NW, Ireland.
Hamish D RodgerFishVet Group Ireland, Unit 7b Oranmore Business Park, Oranmore, Co, Galway, H91 XP3F, Ireland.
Ian O'ConnorMarine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Dublin Road, Galway, Co., Galway, H91 T8NW, Ireland.
Ariadna Sitjà-BobadillaFish Pathology Group, Instituto de Acuicultura Torre de la Sal (IATS-CSIC), Castellón, 12595, Spain.
Jaume Pérez-SánchezNutrigenomics and Fish Growth Endocrinology Group, Instituto de Acuicultura Torre de la Sal (IATS-CSIC), Castellón, 12595, Spain.
M Carla PiazzonFish Pathology Group, Instituto de Acuicultura Torre de la Sal (IATS-CSIC), Castellón, 12595, Spain. carla.piazzon@csic.es.ORCID 0000-0002-4949-8984
Instituto de Acuicultura Torre de la Sal · ESGalway-Mayo Institute of Technology · IEMarine Institute · IE

Funding

EC | Horizon 2020 (European Union Framework Programme for Research and Innovation) AE030036Fundación General CSIC (Fundación General Consejo Superior de Investigaciones Científicas) 201740E013Irish Research Council EBPPG/2013/2
6 · The paper itself

Abstract

Amoebic gill disease (AGD) is one of the main diseases affecting Atlantic salmon (Salmo salar L.) mariculture. Hallmarks of AGD are hyperplasia of the lamellar epithelium and increased production of gill mucus. This study investigated the expression of genes involved in mucus secretion, cell cycle regulation, immunity and oxidative stress in gills using a targeted 21-gene PCR array. Gill samples were obtained from experimental and natural Neoparamoeba perurans infections, and sampling points included progressive infection stages and post-freshwater treatment. Up-regulation of genes related to mucin secretion and cell proliferation, and down-regulation of pro-inflammatory and pro-apoptotic genes were associated with AGD severity, while partial restoration of the gill homeostasis was detected post-treatment. Mucins and Th2 cytokines accoun ted for most of the variability observed between groups highlighting their key role in AGD. Two mucins (muc5, muc18) showed differential regulation upon disease. Substantial up-regulation of the secreted muc5 was detected in clinical AGD, and the membrane bound muc18 showed an opposite pattern. Th2 cytokines, il4/13a and il4/13b2, were significantly up-regulated from 2 days post-infection onwards, and changes were lesion-specific. Despite the differences between experimental and natural infections, both yielded comparable results that underline the importance of the studied genes in the respiratory organs of fish, and during AGD progression.

Indexed as

AmoebaAnimalsDown-RegulationFish DiseasesGene ExpressionGillsInflammationInterleukin-13Interleukin-4MucinsSalmo salarUp-RegulationInterleukin-13Interleukin-4Mucins

Identifiers

PMID30209326
PMCPMC6135806
OpenAlexW2889787669

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.