Evidence map›Paper›PMID 30209257›Full record

ArticleScientific reports2018

MIgGGly (mouse IgG glycosylation analysis) - a high-throughput method for studying Fc-linked IgG N-glycosylation in mice with nanoUPLC-ESI-MS.

Olga O Zaytseva, Bas C Jansen, Maja Hanić, Mia Mrčela, Genadij Razdorov, Ranko Stojković, Julija Erhardt, Ilija Brizić, Stipan Jonjić, Marija Pezer and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  9. Genetic Regulation of Immunoglobulin G Glycosylation.Experientia supplementum (2012) · 2021
    Article
  10. Article
  11. Article
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  13. Article
  14. Fc-Linked IgGFrontiers in cell and developmental biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Olga O ZaytsevaGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia. ozaitseva@genos.hr.ORCID 0000-0003-3960-5157
Bas C JansenGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia.
Maja HanićGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia.ORCID 0000-0001-6152-2054
Mia MrčelaDepartment of Chemistry, Faculty of Science, University of Zagreb, Zagreb, 10000, Croatia.
Genadij RazdorovGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia.
Ranko StojkovićDivision of molecular medicine, Ruđer Bošković Institute, Zagreb, 10000, Croatia.
Julija ErhardtDepartment of Biology, Faculty of Science, University of Zagreb, Zagreb, 10000, Croatia.
Ilija BrizićDepartment of Histology and Embryology, Faculty of Medicine, University of Rijeka, Rijeka, 51000, Croatia.
Stipan JonjićDepartment of Histology and Embryology, Faculty of Medicine, University of Rijeka, Rijeka, 51000, Croatia.ORCID 0000-0001-5003-3108
Marija PezerGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia.ORCID 0000-0002-6480-1427
Gordan LaucGenos Glycoscience Research Laboratory, Zagreb, 10000, Croatia.
Genos (Croatia) · HRUniversity of Zagreb · HRUniversity of Rijeka · HRRuđer Bošković Institute · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunoglobulin G (IgG) N-glycosylation is crucial for its effector functions. It is a complex trait, and large sample sets are needed to discover multiple genetic factors that underlie it. While in humans such high-throughput studies of IgG N-glycans became usual, only one has been carried out in mice. Here we describe and validate a method for the relative quantification of IgG Fc-linked N-glycans in a subclass-specific manner using nano-reverse phase liquid chromatography coupled with mass-spectrometry (nanoRP-LC-MS) applied to murine IgG. High-throughput data processing is ensured by the LaCyTools software. We have shown that IgG isolation procedure is the main source of technical variation in the current protocol. The major glycoforms were quantified reliably with coefficients of variation below 6% for all the analytes with relative abundances above 5%. We have applied our method to a sample set of 3 inbred strains: BALB/c, C57BL/6 and C3H and observed differences in subclass-specific and strain-specific N-glycosylation of IgG, suggesting a significant genetic component in the regulation of Fc-linked IgG N-glycosylation.

Indexed as

AnimalsChromatography, High Pressure LiquidGlycoproteinsGlycosylationImmunoglobulin Fc FragmentsImmunoglobulin GMiceMice, Inbred BALB CMice, Inbred C3HMice, Inbred C57BLPolysaccharidesSpectrometry, Mass, Electrospray IonizationGlycoproteinsglycosylated IgGImmunoglobulin Fc FragmentsImmunoglobulin GPolysaccharides

Identifiers

PMID30209257
PMCPMC6135756
OpenAlexW2892347345

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.