Evidence map›Paper›PMID 30209219›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Homologous recombination is an intrinsic defense against antiviral RNA interference.

Lauren C Aguado, Tristan X Jordan, Emily Hsieh, Daniel Blanco-Melo, John Heard, Maryline Panis, Marco Vignuzzi, Benjamin R tenOever

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Seneca Valley virus replicons are packaged inMolecular therapy oncolytics · 2023
    Article
  9. Recombination in Positive-Strand RNA Viruses.Frontiers in microbiology · 2022
    Review
  10. Article
  11. Synthetic Virology: Building Viruses to Better Understand Them.Cold Spring Harbor perspectives in medicine · 2020
    Review
  12. Astrovirus evolution and emergence.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2019
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lauren C AguadoDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Tristan X JordanDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Emily HsiehDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Daniel Blanco-MeloDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
John HeardDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Maryline PanisDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Marco VignuzziViral Populations and Pathogenesis Unit, Institute Pasteur, 75015 Paris, France.
Benjamin R tenOeverDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029; Benjamin.tenOever@mssm.edu.

Funding

TRAINING PROGRAM: MECHANISMS OF VIRUS-HOST INTERACTIONST32AI007647 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI Domenico Tortorella · 2000 to 2026
$11.5M
The mammalian small RNA machinery and its role in antiviral defensesR01AI110575 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI TENOEVER, BENJAMIN R. · 2015 to 2019
$2.1M
NIAID NIH HHS R01 AI110575NIAID NIH HHS T32 AI007647
6 · The paper itself

Abstract

RNA interference (RNAi) is the major antiviral defense mechanism of plants and invertebrates, rendering the capacity to evade it a defining factor in shaping the viral landscape. Here we sought to determine whether different virus replication strategies provided any inherent capacity to evade RNAi in the absence of an antagonist. Through the exploitation of host microRNAs, we recreated an RNAi-like environment in vertebrates and directly compared the capacity of positive- and negative-stranded RNA viruses to cope with this selective pressure. Applying this defense against four distinct viral families revealed that the capacity to undergo homologous recombination was the defining attribute that enabled evasion of this defense. Independent of gene expression strategy, positive-stranded RNA viruses that could undergo strand switching rapidly excised genomic material, while negative-stranded viruses were effectively targeted and cleared upon RNAi-based selection. These data suggest a dynamic relationship between host antiviral defenses and the biology of virus replication in shaping pathogen prevalence.

Indexed as

Immunity, InnateA549 CellsAnimalsHomologous RecombinationHumansMiceMice, KnockoutRNA InterferenceRNA, Small InterferingRNA VirusesRNA Virus InfectionsVirus ReplicationRNA, Small Interferinghomologous recombinationmiRNARNAivirus adaptationvirus polarity

Identifiers

PMID30209219
PMCPMC6166822

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.