Evidence map›Paper›PMID 30208944›Full record

ArticleBMC plant biology2018

Functional study of CHS gene family members in citrus revealed a novel CHS gene affecting the production of flavonoids.

Zhibin Wang, Qibin Yu, Wanxia Shen, Choaa A El Mohtar, Xiaochun Zhao, Fredrick G Gmitter

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
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  4. Identification and Expression Profile of the Chalcone Synthase (International journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zhibin WangCitrus Research Institute, Southwest University, Xiema, Beibei, Chongqing, 400715, China.
Qibin YuCitrus Research and Education Center, University of Florida, 700 Experiment Station Rd, Lake Alfred, Florida, 33850, USA.
Wanxia ShenCitrus Research Institute, Southwest University, Xiema, Beibei, Chongqing, 400715, China.
Choaa A El MohtarCitrus Research and Education Center, University of Florida, 700 Experiment Station Rd, Lake Alfred, Florida, 33850, USA.
Xiaochun ZhaoCitrus Research Institute, Southwest University, Xiema, Beibei, Chongqing, 400715, China. zhaoxiaochun@cric.cn.
Fredrick G GmitterCitrus Research and Education Center, University of Florida, 700 Experiment Station Rd, Lake Alfred, Florida, 33850, USA. fgmitter@ufl.edu.ORCID http://orcid.org/0000-0002-7499-0022
Florida Department of Citrus · USSouthwest University · CN

Funding

111 project B18044Citrus Research and Development Foundation 00098334New varieties, Development and Management Corporation, on behalf of the Florida citrus growers AWD02897
6 · The paper itself

Abstract

backgroundCitrus flavonoids are considered as the important secondary metabolites because of their biological and pharmacological activities. Chalcone synthase (CHS) is a key enzyme that catalyses the first committed step in the flavonoid biosynthetic pathway. CHS genes have been isolated and characterized in many plants. Previous studies indicated that CHS is a gene superfamily. In citrus, the number of CHS members and their contribution to the production of flavonoids remains a mystery. In our previous study, the copies of CitCHS2 gene were found in different citrus species and the sequences are highly conserved, but the flavonoid content varied significantly among those species.

resultsFrom seventy-seven CHS and CHS-like gene sequences, ten CHS members were selected as candidates according to the features of their sequences. Among these candidates, expression was detected from only three genes. A predicted CHS sequence was identified as a novel CHS gene. The structure analysis showed that the gene structure of this novel CHS is very similar to other CHS genes. All three CHS genes were highly conserved and had a basic structure that included one intron and two exons, although they had different expression patterns in different tissues and developmental stages. These genes also presented different sensitivities to methyl jasmonate (MeJA) treatment. In transgenic plants, the expression of CHS genes was significantly correlated with the production of flavonoids. The three CHS genes contributed differently to the production of flavonoids.

conclusionOur study indicated that CitCHS is a gene superfamily including at least three functional members. The expression levels of the CHS genes are highly correlated to the biosynthesis of flavonoids. The CHS enzyme is dynamically produced from several CHS genes, and the production of total flavonoids is regulated by the overall expression of CHS family genes.

Indexed as

AcetatesAcyltransferasesCitrusCyclopentanesFlavonoidsGenes, PlantMultigene FamilyOxylipinsPhylogenyPlant Growth RegulatorsAcetatesAcyltransferasesCyclopentanesflavanone synthetaseFlavonoidsmethyl jasmonateOxylipinsPlant Growth RegulatorsChalcone synthaseFlavonoidGene expressionGene silencing

Identifiers

PMID30208944
PMCPMC6134715
OpenAlexW2890699168

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.