Evidence map›Paper›PMID 30208617›Full record

ReviewViruses2018

Viruses of Eukaryotic Algae: Diversity, Methods for Detection, and Future Directions.

Samantha R Coy, Eric R Gann, Helena L Pound, Steven M Short, Steven W Wilhelm

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 74 citations in OpenAlex.

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  14. Frontiers in microbiology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Samantha R CoyThe Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, USA. srose16@tennessee.edu.ORCID 0000-0001-8824-1586
Eric R GannThe Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, USA. egann@tennessee.edu.ORCID 0000-0001-9410-7949
Helena L PoundThe Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, USA. hpound@tennessee.edu.ORCID 0000-0002-6505-9789
Steven M ShortThe Department of Biology, The University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada. steven.short@utoronto.ca.
Steven W WilhelmThe Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, USA. wilhelm@utk.edu.ORCID 0000-0001-6283-8077
University of Tennessee at Knoxville · USUniversity of Toronto · CA

Funding

Gordon and Betty Moore Foundation 4971Kenneth and Blaire Mossman Endowment to the University of Tennessee .
6 · The paper itself

Abstract

The scope for ecological studies of eukaryotic algal viruses has greatly improved with the development of molecular and bioinformatic approaches that do not require algal cultures. Here, we review the history and perceived future opportunities for research on eukaryotic algal viruses. We begin with a summary of the 65 eukaryotic algal viruses that are presently in culture collections, with emphasis on shared evolutionary traits (e.g., conserved core genes) of each known viral type. We then describe how core genes have been used to enable molecular detection of viruses in the environment, ranging from PCR-based amplification to community scale "-omics" approaches. Special attention is given to recent studies that have employed network-analyses of -omics data to predict virus-host relationships, from which a general bioinformatics pipeline is described for this type of approach. Finally, we conclude with acknowledgement of how the field of aquatic virology is adapting to these advances, and highlight the need to properly characterize new virus-host systems that may be isolated using preliminary molecular surveys. Researchers can approach this work using lessons learned from the

Indexed as

ChlorophytaCryptophytaDinoflagellidaDNA VirusesHaptophytaRhodophytaRNA VirusesStramenopilesVirologyalgal-NCLDVeukaryotic algal virusphytoplanktonPicornavirales

Identifiers

PMID30208617
PMCPMC6165237
OpenAlexW2892100861

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.