Evidence map›Paper›PMID 30208271›Full record

ArticleJournal of the American Chemical Society2018

The Zinc Linchpin Motif in the DNA Repair Glycosylase MUTYH: Identifying the Zn

Nicole N Nuñez, Cindy Khuu, C Satheesan Babu, Steve J Bertolani, Anisha N Rajavel, Jensen E Spear, Jeremy A Armas, Jon D Wright, Justin B Siegel, Carmay Lim and 1 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  11. Review
  12. Noncatalytic Domains in DNA Glycosylases.International journal of molecular sciences · 2022
    Review
  13. Review
  14. Article
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  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Nicole N Nuñez
Cindy Khuu
C Satheesan BabuInstitute of Biomedical Sciences , Academia Sinica , Taipei , Taiwan 11529 , Republic of China.ORCID 0000-0001-6458-4090
Steve J Bertolani
Anisha N Rajavel
Jensen E Spear
Jeremy A Armas
Jon D WrightInstitute of Biomedical Sciences , Academia Sinica , Taipei , Taiwan 11529 , Republic of China.
Justin B Siegel
Carmay LimInstitute of Biomedical Sciences , Academia Sinica , Taipei , Taiwan 11529 , Republic of China.ORCID 0000-0001-9077-7769
University of California, Davis · USInstitute of Biomedical Sciences, Academia Sinica · TW

Funding

ENVIRONMENTAL TOXICOLOGYT32ES007059 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI Laura S Van Winkle · 1985 to 2026
$7.9M
RECOGNITION AND REPAIR OF MISMATCHED DNA BY MUTYR01CA067985 · NCI · UNIVERSITY OF UTAH · PI DAVID, SHEILA SUE · 2000 to 2025
$5.6M
G/A MISMATCH RECOGNITION AND REPAIR BY E COLI MUTYR29CA067985 · NCI · UNIVERSITY OF UTAH · PI DAVID, SHEILA SUE · 1995 to 1999
–
NCI NIH HHS R01 CA067985NCI NIH HHS R29 CA067985NIEHS NIH HHS T32 ES007059
6 · The paper itself

Abstract

The DNA base excision repair (BER) glycosylase MUTYH prevents DNA mutations by catalyzing adenine (A) excision from inappropriately formed 8-oxoguanine (8-oxoG):A mismatches. The importance of this mutation suppression activity in tumor suppressor genes is underscored by the association of inherited variants of MUTYH with colorectal polyposis in a hereditary colorectal cancer syndrome known as MUTYH-associated polyposis, or MAP. Many of the MAP variants encompass amino acid changes that occur at positions surrounding the two-metal cofactor-binding sites of MUTYH. One of these cofactors, found in nearly all MUTYH orthologs, is a [4Fe-4S]

Indexed as

Amino Acid MotifsAnimalsBase SequenceBinding SitesCysteineDNA GlycosylasesGeobacillus stearothermophilusHumansLigandsMiceMutationProtein BindingSequence AlignmentZincCysteineDNA GlycosylasesLigandsmutY adenine glycosylaseZinc

Identifiers

PMID30208271
PMCPMC6443246
OpenAlexW2891643654

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.