Evidence map›Paper›PMID 30207693›Full record

ArticleACS synthetic biology2018

Reconstitution of Mammalian Enzymatic Deacylation Reactions in Live Bacteria Using Native Acylated Substrates.

Emanuel M Avrahami, Shahar Levi, Eyal Zajfman, Clil Regev, Oshrit Ben-David, Eyal Arbely

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Isoform-specific regulation of PKM by acetylation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Critical review of non-histone human substrates of metal-dependent lysine deacetylases.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Emanuel M AvrahamiDepartment of Life Sciences , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.
Shahar LeviDepartment of Chemistry and The National Institute for Biotechnology in the Negev , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.
Eyal ZajfmanDepartment of Life Sciences , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.
Clil RegevDepartment of Chemistry and The National Institute for Biotechnology in the Negev , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.
Oshrit Ben-DavidDepartment of Chemistry and The National Institute for Biotechnology in the Negev , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.
Eyal ArbelyDepartment of Life Sciences , Ben-Gurion University of the Negev , Beer-Sheva 8410501 , Israel.ORCID 0000-0002-0284-0092
Ben-Gurion University of the Negev · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysine deacetylases (KDACs) are enzymes that catalyze the hydrolysis of acyl groups from acyl-lysine residues. The recent identification of thousands of putative acylation sites, including specific acetylation sites, created an urgent need for biochemical methodologies aimed at better characterizing KDAC-substrate specificity and evaluating KDACs activity. To address this need, we utilized genetic code expansion technology to coexpress site-specifically acylated substrates with mammalian KDACs, and study substrate recognition and deacylase activity in live Escherichia coli. In this system the bacterial cell serves as a "biological test tube" in which the incubation of a single mammalian KDAC and a potential peptide or full-length acylated substrate transpires. We report novel deacetylation activities of Zn

Indexed as

AcylationAnimalsBiocatalysisCarboxy-LyasesEscherichia coliHumansMammalsSirtuinsSubstrate SpecificityCarboxy-Lyaseslysine decarboxylaseSirtuinsgenetic code expansionhistone deacetylaseKDAClysine acetylationsirtuin

Identifiers

PMID30207693
PMCPMC6198279
OpenAlexW2889958470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.