Evidence map›Paper›PMID 30206424›Full record

ArticleThe ISME journal2019

Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment.

Eleanor Jameson, Jason Stephenson, Helen Jones, Andrew Millard, Anne-Kristin Kaster, Kevin J Purdy, Ruth Airs, J Colin Murrell, Yin Chen

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Diverse methylotrophic methanogenic archaea cause high methane emissions from seagrass meadows.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Aerobic bacterial methane synthesis.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Eleanor JamesonSchool of Life Sciences, University of Warwick, Warwick, CV4 7AL, UK. Eleanor.jameson@warwick.ac.uk.
Jason StephensonSchool of Life Sciences, University of Warwick, Warwick, CV4 7AL, UK.
Helen JonesSchool of Life Sciences, University of Warwick, Warwick, CV4 7AL, UK.
Andrew MillardDepartment of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 7RH, UK.
Anne-Kristin KasterKarlsruhe Institute of Technology, Institute for Biological Interfaces (IBG 5), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, Karlsruhe, 76344, Germany.
Kevin J PurdySchool of Life Sciences, University of Warwick, Warwick, CV4 7AL, UK.
Ruth AirsPlymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, UK.
J Colin MurrellUniversity of East Anglia, Norwich Research Park, Norfolk, Norwich, NR4 7TJ, UK.
Yin ChenSchool of Life Sciences, University of Warwick, Warwick, CV4 7AL, UK. Y.chen.25@warwick.ac.uk.ORCID http://orcid.org/0000-0002-0367-4276
University of Warwick · GBKarlsruhe Institute of Technology · DEPlymouth Marine Laboratory · GBUniversity of East Anglia · GBUniversity of Leicester · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Coastal saltmarsh sediments represent an important source of natural methane emissions, much of which originates from quaternary and methylated amines, such as choline and trimethylamine. In this study, we combine DNA stable isotope probing with high throughput sequencing of 16S rRNA genes and

Indexed as

WetlandsCholineDeltaproteobacteriaGeologic SedimentsHigh-Throughput Nucleotide SequencingMetagenomeMetagenomicsMethaneMethanosarcinaceaeMethylaminesRNA, Ribosomal, 16SCholineMethaneMethylaminesRNA, Ribosomal, 16Strimethylamine

Identifiers

PMID30206424
PMCPMC6331629
OpenAlexW2890367990

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.