Evidence map›Paper›PMID 30206266›Full record

ArticleScientific reports2018

Visualisation and analysis of hepatitis C virus non-structural proteins using super-resolution microscopy.

Christopher Bartlett, Alistair Curd, Michelle Peckham, Mark Harris

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. In Vitro Antiviral Activity of Tyrosinase from MushroomPharmaceuticals (Basel, Switzerland) · 2021
    Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christopher BartlettSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Alistair CurdSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.ORCID 0000-0002-3949-7523
Michelle PeckhamSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. m.peckham@leeds.ac.uk.ORCID 0000-0002-3754-2028
Mark HarrisSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. m.harris@leeds.ac.uk.ORCID 0000-0002-9821-1003
University of Leeds · GB

Funding

Medical Research Council MR/K015613/1Wellcome TrustWellcome Trust 096670MAWellcome Trust 099759
6 · The paper itself

Abstract

Hepatitis C virus (HCV) RNA replication occurs in the cytosol of infected cells within a specialised membranous compartment. How the viral non-structural (NS) proteins are associated and organised within these structures remains poorly defined. We employed a super-resolution microscopy approach to visualise NS3 and NS5A in HCV infected cells. Using single molecule localisation microscopy, both NS proteins were resolved as clusters of localisations smaller than the diffraction-limited volume observed by wide-field. Analysis of the protein clusters identified a significant difference in size between the NS proteins. We also observed a reduction in NS5A cluster size following inhibition of RNA replication using daclatasvir, a phenotype which was maintained in the presence of the Y93H resistance associated substitution and not observed for NS3 clusters. These results provide insight into the NS protein organisation within hepatitis C virus RNA replication complexes and the mode of action of NS5A inhibitors.

Indexed as

Antiviral AgentsCarbamatesDEAD-box RNA HelicasesDrug Resistance, ViralGenotypeHepacivirusHepatitis CHumansImidazolesMicroscopyNucleoside-TriphosphatasePyrrolidinesRNA-Dependent RNA PolymeraseRNA, ViralSerine EndopeptidasesValineAntiviral AgentsCarbamatesdaclatasvirDEAD-box RNA HelicasesImidazolesNS3 protein, hepatitis C virusNS-5 protein, hepatitis C virusNucleoside-TriphosphatasePyrrolidinesRNA-Dependent RNA PolymeraseRNA, ViralSerine EndopeptidasesValineViral Nonstructural ProteinsViral Proteases

Identifiers

PMID30206266
PMCPMC6134135
OpenAlexW2891379194

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.