Evidence map›Paper›PMID 30205482›Full record

ArticleInternational journal of molecular sciences2018

Comparative Transcriptomics Identifies Novel Genes and Pathways Involved in Post-Traumatic Osteoarthritis Development and Progression.

Aimy Sebastian, Jiun C Chang, Melanie E Mendez, Deepa K Murugesh, Sarah Hatsell, Aris N Economides, Blaine A Christiansen, Gabriela G Loots

Open access · goldAbstract readComparative Study
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

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  19. LPS-Induced Inflammation Prior to Injury Exacerbates the Development of Post-Traumatic Osteoarthritis in Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Aimy SebastianPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratories, Livermore, CA 95101, USA. sebastian4@llnl.gov.ORCID 0000-0002-7822-7040
Jiun C ChangPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratories, Livermore, CA 95101, USA. JiunChiun.Chang@ucsf.edu.
Melanie E MendezPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratories, Livermore, CA 95101, USA. mendez20@llnl.gov.
Deepa K MurugeshPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratories, Livermore, CA 95101, USA. murugesh2@llnl.gov.
Sarah HatsellRegeneron Pharmaceuticals, Tarrytown, NY 10020, USA. sarah.hatsell@regeneron.com.
Aris N EconomidesRegeneron Pharmaceuticals, Tarrytown, NY 10020, USA. aris.economides@regeneron.com.
Blaine A ChristiansenDepartment of Orthopedic Surgery, UC Davis Medical Center, Sacramento, CA 95101, USA. bchristiansen@ucdavis.edu.
Gabriela G LootsPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratories, Livermore, CA 95101, USA. loots1@llnl.gov.
Lawrence Livermore National Laboratory · USRegeneron (United States) · USUniversity of California Davis Medical Center · US

Funding

Mechanisms of Systemic Bone Loss Following Femur Fracture in MiceR01AR071459 · NIAMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHRISTIANSEN, BLAINE A. · 2017 to 2021
$1.8M
LLNL LDRD 16-ERD-007National Institutes of Health AR062603NIAMS NIH HHS R01 AR071459U.S. Department of Defense OR130220
6 · The paper itself

Abstract

Anterior cruciate ligament (ACL) injuries often result in post-traumatic osteoarthritis (PTOA). To better understand the molecular mechanisms behind PTOA development following ACL injury, we profiled ACL injury-induced transcriptional changes in knee joints of three mouse strains with varying susceptibility to OA: STR/ort (highly susceptible), C57BL/6J (moderately susceptible) and super-healer MRL/MpJ (not susceptible). Right knee joints of the mice were injured using a non-invasive tibial compression injury model and global gene expression was quantified before and at 1-day, 1-week, and 2-weeks post-injury using RNA-seq. Following injury, injured and uninjured joints of STR/ort and injured C57BL/6J joints displayed significant cartilage degeneration while MRL/MpJ had little cartilage damage. Gene expression analysis suggested that prolonged inflammation and elevated catabolic activity in STR/ort injured joints, compared to the other two strains may be responsible for the severe PTOA phenotype observed in this strain. MRL/MpJ had the lowest expression values for several inflammatory cytokines and catabolic enzymes activated in response to ACL injury. Furthermore, we identified several genes highly expressed in MRL/MpJ compared to the other two strains including

Indexed as

TranscriptomeAnimalsAnterior Cruciate Ligament InjuriesCartilage, ArticularCytokinesDisease ProgressionMetalloproteasesMice, Inbred C57BLOsteoarthritisUp-RegulationCytokinesMetalloproteasesACL injuryB4galnt2C57BL/6JinflammationMRL/MpJosteoarthritisPTOAregenerationRNA-seqSTR/ort

Identifiers

PMID30205482
PMCPMC6163882
OpenAlexW2890911471

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.