Evidence map›Paper›PMID 30205005›Full record

ArticleJournal of medicinal chemistry2018

Discovery and Structure-Based Optimization of Benzimidazole-Derived Activators of SOS1-Mediated Nucleotide Exchange on RAS.

Timothy R Hodges, Jason R Abbott, Andrew J Little, Dhruba Sarkar, James M Salovich, Jennifer E Howes, Denis T Akan, Jiqing Sai, Allison L Arnold, Carrie Browning and 12 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 53 citations in OpenAlex.

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  11. Design, Synthesis, and Bioevaluation of Pyrido[2,3-ACS medicinal chemistry letters · 2023
    Article
  12. Development of SOS1 Inhibitor-Based Degraders to TargetJournal of medicinal chemistry · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 2 countries.

Andrew J Little
James M Salovich
Jiqing Sai
Allison L Arnold
Carrie Browning
Michael C Burns
Tammy Sobolik
Qi Sun
Yugandhar Beesetty
Jesse A Coker
Dirk ScharnBoehringer Ingelheim RCV GmbH & Co. KG , Doktor-Boehringer-Gasse 5-11 , 1120 Vienna , Austria.
Heinz StadtmuellerBoehringer Ingelheim RCV GmbH & Co. KG , Doktor-Boehringer-Gasse 5-11 , 1120 Vienna , Austria.
Olivia W Rossanese
Jason Phan
Alex G WatersonDepartment of Chemistry , Vanderbilt University , Nashville , Tennessee 37232-0146 , United States.
Darryl B McConnellBoehringer Ingelheim RCV GmbH & Co. KG , Doktor-Boehringer-Gasse 5-11 , 1120 Vienna , Austria.
Stephen W FesikDepartment of Chemistry , Vanderbilt University , Nashville , Tennessee 37232-0146 , United States.ORCID 0000-0001-5957-6192
Vanderbilt University · USBoehringer Ingelheim (Austria) · AT

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Expanding the druggable genomeDP1CA174419 · NCI · VANDERBILT UNIVERSITY · PI FESIK, STEPHEN W. · 2012 to 2014
$2.3M
Expanding the druggable genomeDP1OD006933 · OD · VANDERBILT UNIVERSITY · PI FESIK, STEPHEN W. · 2010 to 2011
$1.5M
Console upgrades for biological NMR spectrometersS10RR025677 · NCRR · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2009 to 2009
$460k
Cancer Research UK 11566Cancer Research UK 22897NCI NIH HHS DP1 CA174419NCI NIH HHS P30 CA068485NCRR NIH HHS S10 RR025677NIH HHS DP1 OD006933
6 · The paper itself

Abstract

Son of sevenless homologue 1 (SOS1) is a guanine nucleotide exchange factor that catalyzes the exchange of GDP for GTP on RAS. In its active form, GTP-bound RAS is responsible for numerous critical cellular processes. Aberrant RAS activity is involved in ∼30% of all human cancers; hence, SOS1 is an attractive therapeutic target for its role in modulating RAS activation. Here, we describe a new series of benzimidazole-derived SOS1 agonists. Using structure-guided design, we discovered small molecules that increase nucleotide exchange on RAS in vitro at submicromolar concentrations, bind to SOS1 with low double-digit nanomolar affinity, rapidly enhance cellular RAS-GTP levels, and invoke biphasic signaling changes in phosphorylation of ERK 1/2. These compounds represent the most potent series of SOS1 agonists reported to date.

Indexed as

BenzimidazolesDrug DiscoveryExtracellular Signal-Regulated MAP KinasesGuanine Nucleotide Exchange FactorsGuanosine DiphosphateGuanosine TriphosphateHeLa CellsHumansPhosphorylationProtein ConformationProto-Oncogene Proteins p21(ras)SOS1 ProteinStructure-Activity RelationshipbenzimidazoleBenzimidazolesExtracellular Signal-Regulated MAP KinasesGuanine Nucleotide Exchange FactorsGuanosine DiphosphateGuanosine TriphosphateProto-Oncogene Proteins p21(ras)SOS1 ProteinSOS1 protein, human

Identifiers

PMID30205005
PMCPMC8314423
OpenAlexW2890164144

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.