Evidence map›Paper›PMID 30201976›Full record

ArticleScientific reports2018

Highly Efficient Transfer of 7TM Membrane Protein from Native Membrane to Covalently Circularized Nanodisc.

Vivien Yeh, Tsung-Yen Lee, Chung-Wen Chen, Pai-Chia Kuo, Jessie Shiue, Li-Kang Chu, Tsyr-Yan Yu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Rapid preparation of nanodiscs for biophysical studies.Archives of biochemistry and biophysics · 2021
    Article
  6. Nucleic acid ligands act as a PAM and agonist depending on the intrinsic ligand binding state of P2RY2.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Vivien YehInstitute of Atomic and Molecular Sciences, Academia Sinica, 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan.
Tsung-Yen LeeDepartment of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang-Fu Rd., Hsinchu, 30013, Taiwan.
Chung-Wen ChenInstitute of Atomic and Molecular Sciences, Academia Sinica, 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan.
Pai-Chia KuoInstitute of Physics, Academia Sinica, No.128, Sec. 2, Academia Rd., Taipei, 11529, Taiwan.
Jessie ShiueInstitute of Physics, Academia Sinica, No.128, Sec. 2, Academia Rd., Taipei, 11529, Taiwan.
Li-Kang ChuDepartment of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang-Fu Rd., Hsinchu, 30013, Taiwan. lkchu@mx.nthu.edu.tw.
Tsyr-Yan YuInstitute of Atomic and Molecular Sciences, Academia Sinica, 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan. dharmanmr@gate.sinica.edu.tw.ORCID 0000-0001-7051-4769
Institute of Atomic and Molecular Sciences, Academia Sinica · TWInstitute of Physics, Academia Sinica · TWNational Tsing Hua University · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Incorporating membrane proteins into membrane mimicking systems is an essential process for biophysical studies and structure determination. Monodisperse lipid nanodiscs have been found to be a suitable tool, as they provide a near-native lipid bilayer environment. Recently, a covalently circularized nanodisc (cND) assembled with a membrane scaffold protein (MSP) in circular form, instead of conventional linear form, has emerged. Covalently circularized nanodiscs have been shown to have improved stability, however the optimal strategies for the incorporation of membrane proteins, as well as the physicochemical properties of the membrane protein embedded in the cND, have not been studied. Bacteriorhodopsin (bR) is a seven-transmembrane helix (7TM) membrane protein, and it forms a two dimensional crystal consisting of trimeric bR on the purple membrane of halophilic archea. Here it is reported that the bR trimer in its active form can be directly incorporated into a cND from its native purple membrane. Furthermore, the assembly conditions of the native purple membrane nanodisc (PMND) were optimized to achieve homogeneity and high yield using a high sodium chloride concentration. Additionally, the native PMND was demonstrated to have the ability to assemble over a range of different pHs, suggesting flexibility in the preparation conditions. The native PMND was then found to not only preserve the trimeric structure of bR and most of the native lipids in the PM, but also maintained the photocycle function of bR. This suggests a promising potential for assembling a cND with a 7TM membrane protein, extracted directly from its native membrane environment, while preserving the protein conformation and lipid composition.

Indexed as

BacteriorhodopsinsBiophysicsHalobacterium salinarumHydrogen-Ion ConcentrationLipid BilayersNanostructuresProtein MultimerizationPurple MembraneBacteriorhodopsinsLipid Bilayers

Identifiers

PMID30201976
PMCPMC6131177
OpenAlexW2892357156

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.