Evidence map›Paper›PMID 30198841›Full record

ArticleeLife2018

Peptidoglycan precursor synthesis along the sidewall of pole-growing mycobacteria.

Alam García-Heredia, Amol Arunrao Pohane, Emily S Melzer, Caleb R Carr, Taylor J Fiolek, Sarah R Rundell, Hoong Chuin Lim, Jeffrey C Wagner, Yasu S Morita, Benjamin M Swarts and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 127 citations in OpenAlex.

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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Alam García-Heredia *Molecular and Cellular Biology Graduate Program, University of Massachusetts, Amherst, United States.ORCID http://orcid.org/0000-0002-9573-4087
Amol Arunrao Pohane *Department of Microbiology, University of Massachusetts, Amherst, United States.ORCID http://orcid.org/0000-0003-2574-0366
Emily S MelzerDepartment of Microbiology, University of Massachusetts, Amherst, United States.
Caleb R CarrDepartment of Microbiology, University of Massachusetts, Amherst, United States.
Taylor J FiolekDepartment of Chemistry and Biochemistry, Central Michigan University, Mount Pleasant, United States.
Sarah R RundellDepartment of Chemistry and Biochemistry, Central Michigan University, Mount Pleasant, United States.
Hoong Chuin LimDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, United States.
Jeffrey C WagnerDepartment of Immunology and Infectious Disease, Harvard T.H. Chan School of Public Health, Boston, United States.
Yasu S MoritaMolecular and Cellular Biology Graduate Program, University of Massachusetts, Amherst, United States.ORCID http://orcid.org/0000-0002-4514-9242
Benjamin M SwartsDepartment of Chemistry and Biochemistry, Central Michigan University, Mount Pleasant, United States.
M Sloan SiegristMolecular and Cellular Biology Graduate Program, University of Massachusetts, Amherst, United States.ORCID https://orcid.org/0000-0002-8232-3246
University of Massachusetts Amherst · USCentral Michigan University · USBoston University · USHarvard University · US

Funding

CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAINING GRANTST32GM008515 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 1995 to 2020
$4.3M
Chemical detection of Mycobacterium tuberculosis growth and antibiotic response during infectionDP2AI138238 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI SIEGRIST, MARY SLOAN · 2017 to 2017
$2.3M
Metabolic carbohydrate cell wall probes for bacterial structure and immune recognition studiesU01CA221230 · NCI · UNIVERSITY OF DELAWARE · PI GRIMES, CATHERINE LEIMKUHLER · 2017 to 2019
$1.1M
National Science Foundation CAREER 1654408NCI NIH HHS U01 CA221230NIAID NIH HHS DP2 AI138238NIGMS NIH HHS T32 GM008515NIH HHS New Innovator Award DP2 AI138238NIH HHS Training Grant T32 GM008515NIH HHS U01CA221230Research Corporation for Science Advancement Cottrell College Science Award 22525Simons Foundation Life Sciences Research Foundation Fellowship
6 · The paper itself

Abstract

Rod-shaped mycobacteria expand from their poles, yet d-amino acid probes label cell wall peptidoglycan in this genus at both the poles and sidewall. We sought to clarify the metabolic fates of these probes. Monopeptide incorporation was decreased by antibiotics that block peptidoglycan synthesis or l,d-transpeptidation and in an l,d-transpeptidase mutant. Dipeptides complemented defects in d-alanine synthesis or ligation and were present in lipid-linked peptidoglycan precursors. Characterizing probe uptake pathways allowed us to localize peptidoglycan metabolism with precision: monopeptide-marked l,d-transpeptidase remodeling and dipeptide-marked synthesis were coincident with mycomembrane metabolism at the poles, septum and sidewall. Fluorescent pencillin-marked d,d-transpeptidation around the cell perimeter further suggested that the mycobacterial sidewall is a site of cell wall assembly. While polar peptidoglycan synthesis was associated with cell elongation, sidewall synthesis responded to cell wall damage. Peptidoglycan editing along the sidewall may support cell wall robustness in pole-growing mycobacteria.

Indexed as

AlanineBacterial ProteinsCell CycleCell DivisionCell WallDipeptidesMycobacterium tuberculosisPenicillinsPeptidoglycanAlanineBacterial ProteinsDipeptidesPenicillinsPeptidoglycanbiochemistrycell wallchemical biologyd-amino acidinfectious diseasemetabolic labelingmicrobiologymycobacterium tuberculosismycomembranepeptidoglycan

Identifiers

PMID30198841
PMCPMC6191288
OpenAlexW2889898520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.