Evidence map›Paper›PMID 30198223›Full record

ArticleJournal of clinical neurology (Seoul, Korea)2018

A Novel Homozygous Variant of SETX Causes Ataxia with Oculomotor Apraxia Type 2.

Huma Tariq, Rashid Imran, Sadaf Naz

Open access · diamondAbstract read
In one paragraph

Article in Journal of clinical neurology (Seoul, Korea), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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  5. A NovelGenes · 2024
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  6. A novel mutation inPakistan journal of medical sciences · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Huma TariqSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Rashid ImranPunjab Institute of Neurosciences, Lahore General Hospital, Lahore, Pakistan.
Sadaf NazSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan. naz.sbs@pu.edu.pk.
University of the Punjab · PKLahore General Hospital · PK

Funding

Higher Education Commission, Pakistan 2877
6 · The paper itself

Abstract

background and purposeAutosomal recessive cerebellar ataxias constitute a highly heterogeneous group of neurodegenerative disorders. This study was carried out to determine the clinical and genetic causes of ataxia in two families from Pakistan.

methodsDetailed clinical investigations were carried out on probands in two consanguineous families. Magnetic resonance imaging was performed. Exome sequencing data were examined for likely pathogenic variants. Candidate variants were checked for cosegregation with the phenotype using Sanger sequencing. Public databases including ExAC, GnomAD, dbSNP, and the 1,000 Genome Project as well as ethnically matched controls were checked to determine the frequencies of the alleles. Conservation of missense variants was ensured by aligning orthologous protein sequences from diverse vertebrate species.

resultsReverse phenotyping identified spinocerebellar ataxia, autosomal recessive 1 [OMIM 606002, also referred to as ataxia oculomotor apraxia type 2 (AOA2)] and ataxia telangiectasia (OMIM 208900) in the two families. A novel homozygous missense mutation c.202 C>T (p.Arg68Cys) was identified within senataxin,

conclusionsThis report extends the allelic heterogeneity of

Indexed as

ataxiaataxia-telangiectasiaataxia-telangiectasia mutatedmovement disordersoculomotor apraxiaPakistansenataxin

Identifiers

PMID30198223
PMCPMC6172491
OpenAlexW2895144885

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.