Evidence map›Paper›PMID 30196374›Full record

ArticleGlycoconjugate journal2018

The ammonia-catalyzed release of glycoprotein N-glycans.

Chengjian Wang, Meifang Yang, Xi Gao, Cheng Li, Zihua Zou, Jianli Han, Linjuan Huang, Zhongfu Wang

Abstract read
PubMed Publisher
In one paragraph

Article in Glycoconjugate journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Chengjian WangThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Meifang YangThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Xi GaoThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Cheng LiThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Zihua ZouThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Jianli HanThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China.
Linjuan HuangThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China. huanglj@nwu.edu.cn.
Zhongfu WangThe Education Ministry Key Laboratory of Resource Biology and Biotechnology in Western China and Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, No. 229 North Taibai Road, Xi'an, 710069, Shaanxi Province, China. wangzhf@nwu.edu.cn.
Northwest University · CN

Funding

National Natural Scince Foundation of China 21375103National Natural Scince Foundation of China 31370804National Natural Scince Foundation of China 31600647National Natural Scince Foundation of China 31670808Natural Science Special Fund of Shaanxi Provincial Education Department 16JK1782The Scientific Research Foundation of Northwest University, China 15NW18The Scientific Research Program Fund for Shaanxi Province Key laboratory 16JS109
6 · The paper itself

Abstract

Despite the great significance of release and analysis of glycans from glycoproteins, the existing N-glycan release methods are undermined by some limitations and deficiencies. The traditional enzymatic protocols feature high N-glycan release specificity but are generally costly and inefficient for some types of N-glycans. The existing chemical methods require harsh reaction conditions or are accompanied by the remarkable formation of by-products. Herein, we describe a versatile chemical method for the release and analysis of N-glycans from glycoproteins. This method differs from the existing methods as only aqueous ammonia is used to catalyze the N-glycan release reactions. Optimization of reaction conditions was performed using RNase B as a model glycoprotein and the obtained results indicated a highest N-glycan yield in ammonia at 60 °C for 16 h. Comparison of this method with traditional enzymatic protocols and recently reported NaClO methods confirmed the good reliability and efficiency of the novel approach. We also successfully applied this method to some complex biological samples, such as Ginkgo seed protein, fetal bovine serum (FBS) and hen egg white, and demonstrated its great compatibility with various neutral N-glycans, core α-1,3-fucosylated N-glycans and sialylated N-glycans. This method is very simple and cost-effective, enabling convenient analysis and large-scale preparation of released reducing N-glycans from various biological samples for structural and functional glycomics studies.

Indexed as

AmmoniaAnimalsAvian ProteinsCatalysisCattleChickensGinkgo bilobaGlycoproteinsPlant ProteinsPolysaccharidesSeedsSerum Albumin, BovineAmmoniaAvian ProteinsGlycoproteinsPlant ProteinsPolysaccharidesSerum Albumin, BovineAmmonia-catalyzed releaseGlycoproteinMass spectrometryN-glycanReducing glycan

Identifiers

PMID30196374
OpenAlexW2889845427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.